RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 UBP1Q9NZI7 540 aa6.7□□□□□ -1.34
SKP1-210ENST00000522855 SART1O43290 800 aaKnown RBP6.69□□□□□ -1.34
SKP1-210ENST00000522855 IGSF3O75054 1194 aa6.69□□□□□ -1.34
SKP1-210ENST00000522855 CILPO75339 1184 aa6.69□□□□□ -1.34
SKP1-210ENST00000522855 MAP4P27816 1152 aaKnown RBP6.69□□□□□ -1.34
SKP1-210ENST00000522855 RPL6Q02878 288 aaKnown RBP6.69□□□□□ -1.34
SKP1-210ENST00000522855 C2CD4AQ8NCU7 369 aaPredicted RBP6.69□□□□□ -1.34
SKP1-210ENST00000522855 NKD1Q969G9 470 aa6.69□□□□□ -1.34
SKP1-210ENST00000522855 ZC3H12CQ9C0D7 883 aaKnown RBP6.69□□□□□ -1.34
SKP1-210ENST00000522855 PPP1R1BQ9UD71 204 aaPredicted RBP6.69□□□□□ -1.34
SKP1-210ENST00000522855 COL17A1Q9UMD9 1497 aaPredicted RBP6.68□□□□□ -1.34
SKP1-210ENST00000522855 FAM221AA4D161 298 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
SKP1-210ENST00000522855 FGRP09769 529 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 SOX9P48436 509 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 SEZ6Q53EL9 994 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 NUTM2GQ5VZR2 741 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 INTS5Q6P9B9 1019 aaKnown RBP6.68□□□□□ -1.34
SKP1-210ENST00000522855 REC114Q7Z4M0 266 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 SLITRK4Q8IW52 837 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 GPBAR1Q8TDU6 330 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 KCNF1Q9H3M0 494 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 CCDC86Q9H6F5 360 aaKnown RBP6.68□□□□□ -1.34
SKP1-210ENST00000522855 CACNA2D2Q9NY47 1150 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 PCDHA4Q9UN74 947 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 EFR3BQ9Y2G0 817 aa6.68□□□□□ -1.34
SKP1-210ENST00000522855 OAS3Q9Y6K5 1087 aaKnown RBP6.68□□□□□ -1.34
SKP1-210ENST00000522855 GAS2O43903 313 aaKnown RBP6.67□□□□□ -1.34
SKP1-210ENST00000522855 SLFN14P0C7P3 912 aa6.67□□□□□ -1.34
SKP1-210ENST00000522855 CRKP46108 304 aa6.67□□□□□ -1.34
SKP1-210ENST00000522855 NASPP49321 788 aaPredicted RBP6.67□□□□□ -1.34
SKP1-210ENST00000522855 ZNF165P49910 485 aa6.67□□□□□ -1.34
SKP1-210ENST00000522855 KIF4BQ2VIQ3 1234 aa6.67□□□□□ -1.34
SKP1-210ENST00000522855 HDXQ7Z353 690 aa6.67□□□□□ -1.34
SKP1-210ENST00000522855 KRTAP1-3Q8IUG1 177 aa6.67□□□□□ -1.34
SKP1-210ENST00000522855 EZH1Q92800 747 aaPredicted RBP6.67□□□□□ -1.34
SKP1-210ENST00000522855 CYP4F12Q9HCS2 524 aa6.67□□□□□ -1.34
SKP1-210ENST00000522855 SYNGAP1Q96PV0 1343 aa6.67□□□□□ -1.34
SKP1-210ENST00000522855 TLR3O15455 904 aaKnown RBP6.66□□□□□ -1.34
SKP1-210ENST00000522855 ECEL1O95672 775 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 F13BP05160 661 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 ADH5P11766 374 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 IMPDH2P12268 514 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 DRD2P14416 443 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 HOXA10P31260 410 aaPredicted RBP6.66□□□□□ -1.34
SKP1-210ENST00000522855 GP2P55259 537 aaKnown RBP6.66□□□□□ -1.34
SKP1-210ENST00000522855 MSMPQ1L6U9 139 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 WIPI1Q5MNZ9 446 aaPredicted RBP6.66□□□□□ -1.34
SKP1-210ENST00000522855 EXOSC6Q5RKV6 272 aaKnown RBP6.66□□□□□ -1.34
SKP1-210ENST00000522855 CDPF1Q6NVV7 123 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 MCF2L2Q86YR7 1114 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 SHISA5Q8N114 240 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 REXO1Q8N1G1 1221 aaKnown RBP6.66□□□□□ -1.34
SKP1-210ENST00000522855 GATA6Q92908 595 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 ELMO3Q96BJ8 720 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 MFSD14AQ96MC6 490 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 RAD18Q9NS91 495 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 GINM1Q9NU53 330 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 SNCAIPQ9Y6H5 919 aa6.66□□□□□ -1.34
SKP1-210ENST00000522855 STK10O94804 968 aaKnown RBP6.65□□□□□ -1.34
SKP1-210ENST00000522855 MCM4P33991 863 aa6.65□□□□□ -1.34
SKP1-210ENST00000522855 GTF2F1P35269 517 aaKnown RBP eCLIP6.65□□□□□ -1.34
SKP1-210ENST00000522855 GRIK1P39086 918 aa6.65□□□□□ -1.34
SKP1-210ENST00000522855 NFXL1Q6ZNB6 911 aa6.65□□□□□ -1.34
SKP1-210ENST00000522855 FBXO27Q8NI29 283 aa6.65□□□□□ -1.34
SKP1-210ENST00000522855 CPLX3Q8WVH0 158 aa6.65□□□□□ -1.34
SKP1-210ENST00000522855 FERD3LQ96RJ6 166 aa6.65□□□□□ -1.34
SKP1-210ENST00000522855 HIRIP3Q9BW71 556 aaPredicted RBP6.65□□□□□ -1.34
SKP1-210ENST00000522855 GSX1Q9H4S2 264 aaPredicted RBP6.65□□□□□ -1.34
SKP1-210ENST00000522855 TACC3Q9Y6A5 838 aa6.65□□□□□ -1.34
SKP1-210ENST00000522855 WDR64B1ANS9 1081 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 ZNF862O60290 1169 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 AOC2O75106 756 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 LIG1P18858 919 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 PTPN11Q06124 597 aaPredicted RBP6.64□□□□□ -1.35
SKP1-210ENST00000522855 SOX4Q06945 474 aaPredicted RBP6.64□□□□□ -1.35
SKP1-210ENST00000522855 PDE4BQ07343 736 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 MLECQ14165 292 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 CPSF6Q16630 551 aaKnown RBP eCLIP6.64□□□□□ -1.35
SKP1-210ENST00000522855 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 SOGA3Q5TF21 947 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 MPRIPQ6WCQ1 1025 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.64□□□□□ -1.35
SKP1-210ENST00000522855 C12orf50Q8NA57 414 aaPredicted RBP6.64□□□□□ -1.35
SKP1-210ENST00000522855 WDR18Q9BV38 432 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 PIM2Q9P1W9 311 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 ACTL7BQ9Y614 415 aa6.64□□□□□ -1.35
SKP1-210ENST00000522855 ID3Q02535 119 aa6.63□□□□□ -1.35
SKP1-210ENST00000522855 OR6P1Q8NGX9 317 aa6.63□□□□□ -1.35
SKP1-210ENST00000522855 FBLIM1Q8WUP2 373 aa6.63□□□□□ -1.35
SKP1-210ENST00000522855 PLPPR2Q96GM1 343 aa6.63□□□□□ -1.35
SKP1-210ENST00000522855 CRBNQ96SW2 442 aa6.63□□□□□ -1.35
SKP1-210ENST00000522855 SRRTQ9BXP5 876 aaKnown RBP6.63□□□□□ -1.35
SKP1-210ENST00000522855 BRMS1Q9HCU9 246 aa6.63□□□□□ -1.35
SKP1-210ENST00000522855 PICK1Q9NRD5 415 aa6.63□□□□□ -1.35
SKP1-210ENST00000522855 ADMP35318 185 aa6.62□□□□□ -1.35
SKP1-210ENST00000522855 ERVK-24P63145 666 aa6.62□□□□□ -1.35
SKP1-210ENST00000522855 ZC3H12AQ5D1E8 599 aaKnown RBP6.62□□□□□ -1.35
SKP1-210ENST00000522855 AKAP4Q5JQC9 854 aa6.62□□□□□ -1.35
SKP1-210ENST00000522855 LRFN4Q6PJG9 635 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms