RNA–Protein interactions for RNA: ENST00000522642.1

GINS4-208, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 390 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-208ENST00000522642 PLA2G12BQ9BX93 195 aa9.08□□□□□ -0.96
GINS4-208ENST00000522642 PBX4Q9BYU1 374 aa9.08□□□□□ -0.96
GINS4-208ENST00000522642 MAST2Q6P0Q8 1798 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 SNAP23O00161 211 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 KIAA0355O15063 1070 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 TLL1O43897 1013 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 CSF1RP07333 972 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 PPP2R1AP30153 589 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 ATP2B2Q01814 1243 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 TLE2Q04725 743 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 PPIGQ13427 754 aaKnown RBP eCLIP9.07□□□□□ -0.962e-6■■□□□ 11.5
GINS4-208ENST00000522642 KRT24Q2M2I5 525 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 CAVIN4Q5BKX8 364 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 GJC2Q5T442 439 aaPredicted RBP9.07□□□□□ -0.96
GINS4-208ENST00000522642 DUSP27Q5VZP5 1158 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 APOBEC3HQ6NTF7 200 aaKnown RBP9.07□□□□□ -0.96
GINS4-208ENST00000522642 UBE3BQ7Z3V4 1068 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 PLEKHH3Q7Z736 793 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 HLA-CQ95604 372 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 EDC3Q96F86 508 aaKnown RBP9.07□□□□□ -0.96
GINS4-208ENST00000522642 ASCC2Q9H1I8 757 aaPredicted RBP9.07□□□□□ -0.96
GINS4-208ENST00000522642 TMEM39AQ9NV64 488 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 LTBP2Q14767 1821 aa9.07□□□□□ -0.96
GINS4-208ENST00000522642 H7C1W4 665 aa9.06□□□□□ -0.96
GINS4-208ENST00000522642 MYCNP04198 464 aaPredicted RBP9.06□□□□□ -0.96
GINS4-208ENST00000522642 CHAF1AQ13111 956 aaPredicted RBP9.06□□□□□ -0.96
GINS4-208ENST00000522642 TREML2Q5T2D2 321 aa9.06□□□□□ -0.96
GINS4-208ENST00000522642 LDHAL6AQ6ZMR3 332 aa9.06□□□□□ -0.96
GINS4-208ENST00000522642 ERMP1Q7Z2K6 904 aa9.06□□□□□ -0.96
GINS4-208ENST00000522642 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
GINS4-208ENST00000522642 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
GINS4-208ENST00000522642 PRRX2Q99811 253 aa9.06□□□□□ -0.96
GINS4-208ENST00000522642 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
GINS4-208ENST00000522642 CNNM1Q9NRU3 951 aa9.06□□□□□ -0.96
GINS4-208ENST00000522642 MAP3K2Q9Y2U5 619 aa9.06□□□□□ -0.96
GINS4-208ENST00000522642 DLG5Q8TDM6 1919 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 DCDC2CA8MYV0 355 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 GYG1P46976 350 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 EPHB4P54760 987 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 CCNA1P78396 465 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 MAP2K5Q13163 448 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 DDX10Q13206 875 aaKnown RBP9.05□□□□□ -0.96
GINS4-208ENST00000522642 CCL14Q16627 93 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 PSRC1Q6PGN9 363 aaPredicted RBP9.05□□□□□ -0.96
GINS4-208ENST00000522642 KSR2Q6VAB6 950 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 GPR142Q7Z601 462 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 SLC44A5Q8NCS7 719 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 ZNF280CQ8ND82 737 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 USP6NLQ92738 828 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 MFSD14AQ96MC6 490 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 MYH16Q9H6N6 1097 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 AS3MTQ9HBK9 375 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
GINS4-208ENST00000522642 SPEF2Q9C093 1822 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 SLC5A1P13866 664 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 ITGB8P26012 769 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 PBX2P40425 430 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 ADCYAP1R1P41586 468 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 SPP2Q13103 211 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 CCDC57Q2TAC2 916 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 MORN1Q5T089 497 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 GJD3Q8N144 294 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 TMEM199Q8N511 208 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 FAM84BQ96KN1 310 aaPredicted RBP9.04□□□□□ -0.96
GINS4-208ENST00000522642 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.04□□□□□ -0.96
GINS4-208ENST00000522642 TMOD4Q9NZQ9 345 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 IVNS1ABPQ9Y6Y0 642 aa9.04□□□□□ -0.96
GINS4-208ENST00000522642 AK9Q5TCS8 1911 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 MUC3AQ02505 3323 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 ZNF316A6NFI3 1004 aaPredicted RBP9.03□□□□□ -0.96
GINS4-208ENST00000522642 ENTPD3O75355 529 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 POU3F3P20264 500 aaPredicted RBP9.03□□□□□ -0.96
GINS4-208ENST00000522642 SSTR3P32745 418 aaPredicted RBP9.03□□□□□ -0.96
GINS4-208ENST00000522642 PTPN5P54829 565 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 HMGCS2P54868 508 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 GCKRQ14397 625 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 CCDC30Q5VVM6 783 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 PPP2R2DQ66LE6 453 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 MFSD5Q6N075 450 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 IRF2BPLQ9H1B7 796 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 NKX2-4Q9H2Z4 354 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 USP40Q9NVE5 1235 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 MYH3P11055 1940 aa9.03□□□□□ -0.96
GINS4-208ENST00000522642 PRUNE2Q8WUY3 3088 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 PI4KAP2A4QPH2 592 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 SLC15A5A6NIM6 579 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 NEURL1BA8MQ27 555 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 GRXCR1A8MXD5 290 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 APBB1O00213 710 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 PQBP1O60828 265 aaKnown RBP9.02□□□□□ -0.97
GINS4-208ENST00000522642 TIMP1P01033 207 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 IGKV5-2P06315 115 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 HOXA7P31268 230 aaPredicted RBP9.02□□□□□ -0.97
GINS4-208ENST00000522642 TMPOP42166 694 aaKnown RBP9.02□□□□□ -0.97
GINS4-208ENST00000522642 ERVK-9P63128 1117 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 ERVK-24P63145 666 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 EPHA10Q5JZY3 1008 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 CDC42EP5Q6NZY7 148 aa9.02□□□□□ -0.97
GINS4-208ENST00000522642 RNF180Q86T96 592 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms