RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 PTPRFP10586 1907 aa21.64■■□□□ 1.05
CLK4-211ENST00000522556 ERO1BQ86YB8 467 aa21.63■■□□□ 1.05
CLK4-211ENST00000522556 IFNL1Q8IU54 200 aa21.63■■□□□ 1.05
CLK4-211ENST00000522556 SDR42E1Q8WUS8 393 aa21.63■■□□□ 1.05
CLK4-211ENST00000522556 GPATCH3Q96I76 525 aa21.63■■□□□ 1.05
CLK4-211ENST00000522556 SAGE1Q9NXZ1 904 aa21.63■■□□□ 1.05
CLK4-211ENST00000522556 TTC41PQ6P2S7 1318 aa21.62■■□□□ 1.05
CLK4-211ENST00000522556 PRKAB2O43741 272 aa21.62■■□□□ 1.05
CLK4-211ENST00000522556 MBD4O95243 580 aa21.62■■□□□ 1.05
CLK4-211ENST00000522556 USP5P45974 858 aa21.62■■□□□ 1.05
CLK4-211ENST00000522556 JAG1P78504 1218 aa21.62■■□□□ 1.05
CLK4-211ENST00000522556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.62■■□□□ 1.05
CLK4-211ENST00000522556 TESPA1A2RU30 521 aaPredicted RBP21.61■■□□□ 1.05
CLK4-211ENST00000522556 PPIL2Q13356 520 aa21.61■■□□□ 1.05
CLK4-211ENST00000522556 REM2Q8IYK8 340 aaPredicted RBP21.61■■□□□ 1.05
CLK4-211ENST00000522556 SCYL3Q8IZE3 742 aa21.61■■□□□ 1.05
CLK4-211ENST00000522556 KBTBD3Q8NAB2 608 aa21.61■■□□□ 1.05
CLK4-211ENST00000522556 PUS7LQ9H0K6 701 aaKnown RBP21.61■■□□□ 1.05
CLK4-211ENST00000522556 RWDD1Q9H446 243 aaPredicted RBP21.61■■□□□ 1.05
CLK4-211ENST00000522556 CCL15-CCL14A0A0B4J2E2 113 aa21.6■■□□□ 1.05
CLK4-211ENST00000522556 SMIM22K7EJ46 135 aa21.6■■□□□ 1.05
CLK4-211ENST00000522556 TBC1D12O60347 775 aa21.6■■□□□ 1.05
CLK4-211ENST00000522556 CCL15Q16663 113 aa21.6■■□□□ 1.05
CLK4-211ENST00000522556 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
CLK4-211ENST00000522556 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.6■■□□□ 1.05
CLK4-211ENST00000522556 PTPRAP18433 802 aa21.59■■□□□ 1.05
CLK4-211ENST00000522556 UBE3CQ15386 1083 aa21.59■■□□□ 1.05
CLK4-211ENST00000522556 PI4KBQ9UBF8 816 aa21.59■■□□□ 1.05
CLK4-211ENST00000522556 GLRX3O76003 335 aaKnown RBP21.58■■□□□ 1.05
CLK4-211ENST00000522556 CYP2D6P10635 497 aa21.58■■□□□ 1.05
CLK4-211ENST00000522556 GTF2A2P52657 109 aa21.58■■□□□ 1.05
CLK4-211ENST00000522556 PDE1AP54750 535 aa21.58■■□□□ 1.05
CLK4-211ENST00000522556 PPATQ06203 517 aa21.58■■□□□ 1.05
CLK4-211ENST00000522556 MOGSQ13724 837 aa21.58■■□□□ 1.05
CLK4-211ENST00000522556 TMED8Q6PL24 325 aaPredicted RBP21.58■■□□□ 1.05
CLK4-211ENST00000522556 DHX36Q9H2U1 1008 aaKnown RBP21.58■■□□□ 1.05
CLK4-211ENST00000522556 CTNND1O60716 968 aaKnown RBP21.57■■□□□ 1.04
CLK4-211ENST00000522556 PLCD1P51178 756 aa21.57■■□□□ 1.04
CLK4-211ENST00000522556 NUCB1Q02818 461 aa21.57■■□□□ 1.04
CLK4-211ENST00000522556 METTL16Q86W50 562 aaKnown RBP21.57■■□□□ 1.04
CLK4-211ENST00000522556 TNS4Q8IZW8 715 aa21.57■■□□□ 1.04
CLK4-211ENST00000522556 OSBP2Q969R2 916 aa21.57■■□□□ 1.04
CLK4-211ENST00000522556 CRNKL1Q9BZJ0 848 aaKnown RBP21.57■■□□□ 1.04
CLK4-211ENST00000522556 DCP1AQ9NPI6 582 aaPredicted RBP21.57■■□□□ 1.04
CLK4-211ENST00000522556 STAP2Q9UGK3 403 aa21.57■■□□□ 1.04
CLK4-211ENST00000522556 HERC5Q9UII4 1024 aaKnown RBP21.57■■□□□ 1.04
CLK4-211ENST00000522556 KCNH4Q9UQ05 1017 aa21.57■■□□□ 1.04
CLK4-211ENST00000522556 ZHX2Q9Y6X8 837 aa21.57■■□□□ 1.04
CLK4-211ENST00000522556 BTBD19C9JJ37 291 aa21.56■■□□□ 1.04
CLK4-211ENST00000522556 M0R2C6 588 aa21.56■■□□□ 1.04
CLK4-211ENST00000522556 ERC2O15083 957 aa21.56■■□□□ 1.04
CLK4-211ENST00000522556 GDF11O95390 407 aa21.56■■□□□ 1.04
CLK4-211ENST00000522556 CRHR2Q13324 411 aa21.56■■□□□ 1.04
CLK4-211ENST00000522556 CHD1LQ86WJ1 897 aa21.56■■□□□ 1.04
CLK4-211ENST00000522556 CERS3Q8IU89 383 aa21.56■■□□□ 1.04
CLK4-211ENST00000522556 SEC62Q99442 399 aaKnown RBP21.56■■□□□ 1.04
CLK4-211ENST00000522556 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
CLK4-211ENST00000522556 ZSWIM8A7E2V4 1837 aa21.56■■□□□ 1.04
CLK4-211ENST00000522556 CYP2D7A0A087X1C5 515 aa21.55■■□□□ 1.04
CLK4-211ENST00000522556 CAP2P40123 477 aa21.55■■□□□ 1.04
CLK4-211ENST00000522556 INHBEP58166 350 aa21.55■■□□□ 1.04
CLK4-211ENST00000522556 SNAPC2Q13487 334 aa21.55■■□□□ 1.04
CLK4-211ENST00000522556 DGKZQ13574 1117 aa21.55■■□□□ 1.04
CLK4-211ENST00000522556 CRACR2BQ8N4Y2 399 aaPredicted RBP21.55■■□□□ 1.04
CLK4-211ENST00000522556 PICK1Q9NRD5 415 aa21.55■■□□□ 1.04
CLK4-211ENST00000522556 HLA-DOAP06340 250 aa21.54■■□□□ 1.04
CLK4-211ENST00000522556 ZNF296Q8WUU4 475 aaPredicted RBP21.54■■□□□ 1.04
CLK4-211ENST00000522556 APPBP2Q92624 585 aa21.54■■□□□ 1.04
CLK4-211ENST00000522556 MCM9Q9NXL9 1143 aa21.54■■□□□ 1.04
CLK4-211ENST00000522556 AFG3L2Q9Y4W6 797 aa21.54■■□□□ 1.04
CLK4-211ENST00000522556 LOC285556D6RIA3 1793 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 TRIM75PA6NK02 468 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 GPR25O00155 361 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 RNF113AO15541 343 aaKnown RBP21.53■■□□□ 1.04
CLK4-211ENST00000522556 CETPP11597 493 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 CAP1Q01518 475 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 PLEKHM2Q8IWE5 1019 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 SLC44A5Q8NCS7 719 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 FSD1Q9BTV5 496 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 CFHR5Q9BXR6 569 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 MYH8P13535 1937 aa21.53■■□□□ 1.04
CLK4-211ENST00000522556 PDE4AP27815 886 aa21.52■■□□□ 1.04
CLK4-211ENST00000522556 SHMT1P34896 483 aa21.52■■□□□ 1.04
CLK4-211ENST00000522556 ZSCAN25Q6NSZ9 544 aa21.52■■□□□ 1.04
CLK4-211ENST00000522556 GPAT2Q6NUI2 795 aa21.52■■□□□ 1.04
CLK4-211ENST00000522556 FOXP4Q8IVH2 680 aaPredicted RBP21.52■■□□□ 1.04
CLK4-211ENST00000522556 DYNLL2Q96FJ2 89 aa21.52■■□□□ 1.04
CLK4-211ENST00000522556 STRBPQ96SI9 672 aaKnown RBP21.52■■□□□ 1.04
CLK4-211ENST00000522556 SERPINB13Q9UIV8 391 aa21.52■■□□□ 1.04
CLK4-211ENST00000522556 SLC4A4Q9Y6R1 1079 aa21.52■■□□□ 1.04
CLK4-211ENST00000522556 ALDH1A1P00352 501 aa21.51■■□□□ 1.03
CLK4-211ENST00000522556 POLR3DP05423 398 aaPredicted RBP21.51■■□□□ 1.03
CLK4-211ENST00000522556 GABPAQ06546 454 aa21.51■■□□□ 1.03
CLK4-211ENST00000522556 TAF1CQ15572 869 aaPredicted RBP21.51■■□□□ 1.03
CLK4-211ENST00000522556 EHD4Q9H223 541 aa21.51■■□□□ 1.03
CLK4-211ENST00000522556 A0A0G2JLL6 359 aaPredicted RBP21.5■■□□□ 1.03
CLK4-211ENST00000522556 PRRT2Q7Z6L0 340 aaPredicted RBP21.5■■□□□ 1.03
CLK4-211ENST00000522556 TRIM34Q9BYJ4 488 aa21.5■■□□□ 1.03
CLK4-211ENST00000522556 EPB41L4AQ9HCS5 686 aaPredicted RBP21.5■■□□□ 1.03
CLK4-211ENST00000522556 ZBTB21Q9ULJ3 1066 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms