RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 PTMSP20962 102 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 INPP5BP32019 993 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 LBX1P52954 281 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 PPP4CP60510 307 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 DYNLL1P63167 89 aaKnown RBP8.2□□□□□ -1.1
SPIDR-218ENST00000522222 MAP3K9P80192 1104 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 TTF1Q15361 905 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-218ENST00000522222 SMC5Q8IY18 1101 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 OPTNQ96CV9 577 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 OTUD5Q96G74 571 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 ECHDC1Q9NTX5 307 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 PAG1Q9NWQ8 432 aa8.2□□□□□ -1.1
SPIDR-218ENST00000522222 TCRBV5S4A2TA0A5A2 114 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 MANSC4A6NHS7 340 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-218ENST00000522222 SPDYE5A6NIY4 337 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 FAM196BA6NMK8 535 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 SREBF2Q12772 1141 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 SLFNL1Q499Z3 407 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 NOL9Q5SY16 702 aaKnown RBP8.19□□□□□ -1.1
SPIDR-218ENST00000522222 L1TD1Q5T7N2 865 aaKnown RBP8.19□□□□□ -1.1
SPIDR-218ENST00000522222 COL13A1Q5TAT6 717 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-218ENST00000522222 TMED8Q6PL24 325 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-218ENST00000522222 MAPKAPK5Q8IW41 473 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 TGFBRAP1Q8WUH2 860 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 ZKSCAN4Q969J2 545 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-218ENST00000522222 GCC1Q96CN9 775 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 PRDM10Q9NQV6 1147 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 RNF186Q9NXI6 227 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 SAGE1Q9NXZ1 904 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 ZNF112Q9UJU3 913 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 ZNF532Q9HCE3 1301 aa8.19□□□□□ -1.1
SPIDR-218ENST00000522222 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 IGF2BP3O00425 579 aaKnown RBP eCLIP8.18□□□□□ -1.1
SPIDR-218ENST00000522222 TRPA1O75762 1119 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 CHGBP05060 677 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 MX1P20591 662 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 ADD2P35612 726 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 SLC9C2Q5TAH2 1124 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 ERO1BQ86YB8 467 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 CERS3Q8IU89 383 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 PI4K2BQ8TCG2 481 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 RIOK1Q9BRS2 568 aaKnown RBP8.18□□□□□ -1.1
SPIDR-218ENST00000522222 SAP30BPQ9UHR5 308 aaKnown RBP8.18□□□□□ -1.1
SPIDR-218ENST00000522222 SALL3Q9BXA9 1300 aa8.18□□□□□ -1.1
SPIDR-218ENST00000522222 ATAD5Q96QE3 1844 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 MYH1P12882 1939 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 PHF20L1A8MW92 1017 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 MBD4O95243 580 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 USP5P45974 858 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 TM4SF4P48230 202 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 MAP3K10Q02779 954 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 PPIL2Q13356 520 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 SLC4A8Q2Y0W8 1093 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 ANKRD45Q5TZF3 282 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 SKAP1Q86WV1 359 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 IFNL1Q8IU54 200 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 SCYL3Q8IZE3 742 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 LCORLQ8N3X6 602 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 BRI3BPQ8WY22 251 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.17□□□□□ -1.11e-6■■□□□ 13.3
SPIDR-218ENST00000522222 DNAJC18Q9H819 358 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.17□□□□□ -1.1
SPIDR-218ENST00000522222 PALD1Q9ULE6 856 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 ISY1Q9ULR0 285 aaKnown RBP8.17□□□□□ -1.1
SPIDR-218ENST00000522222 TTC41PQ6P2S7 1318 aa8.17□□□□□ -1.1
SPIDR-218ENST00000522222 CCL15-CCL14A0A0B4J2E2 113 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 IRF6O14896 467 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 ERC2O15083 957 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 TBC1D12O60347 775 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 GLRX3O76003 335 aaKnown RBP8.16□□□□□ -1.1
SPIDR-218ENST00000522222 HLA-DOAP06340 250 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 GTF2A2P52657 109 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 RRP1BQ14684 758 aaKnown RBP8.16□□□□□ -1.1
SPIDR-218ENST00000522222 CCL15Q16663 113 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 CCDC84Q86UT8 332 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-218ENST00000522222 HSCBQ8IWL3 235 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 KBTBD3Q8NAB2 608 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 PHIPQ8WWQ0 1821 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 CRNKL1Q9BZJ0 848 aaKnown RBP8.16□□□□□ -1.1
SPIDR-218ENST00000522222 LNPKQ9C0E8 428 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 DHX36Q9H2U1 1008 aaKnown RBP8.16□□□□□ -1.1
SPIDR-218ENST00000522222 ARMT1Q9H993 441 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.16□□□□□ -1.1
SPIDR-218ENST00000522222 PICK1Q9NRD5 415 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 CASP8AP2Q9UKL3 1982 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 SSUH2Q9Y2M2 353 aa8.16□□□□□ -1.1
SPIDR-218ENST00000522222 PTPRFP10586 1907 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 TESPA1A2RU30 521 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-218ENST00000522222 CTNND1O60716 968 aaKnown RBP8.15□□□□□ -1.1
SPIDR-218ENST00000522222 TBC1D8O95759 1140 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 PTPRAP18433 802 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 NUCB1Q02818 461 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 PPATQ06203 517 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 SNAPC2Q13487 334 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 UBE3CQ15386 1083 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 SHROOM1Q2M3G4 852 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-218ENST00000522222 BMP2KLQ5H9B9 411 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 ZSCAN25Q6NSZ9 544 aa8.15□□□□□ -1.1
SPIDR-218ENST00000522222 TNS4Q8IZW8 715 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms