RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ZNF526Q8TF50 670 aaPredicted RBP15.86■□□□□ 0.13
CLK4-210ENST00000522136 RRAGCQ9HB90 399 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 FAM196BA6NMK8 535 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 B4E1Z4 1266 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 PSMA5P28066 241 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 NEK4P51957 841 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 EAPPQ56P03 285 aaPredicted RBP15.86■□□□□ 0.13
CLK4-210ENST00000522136 CHST3Q7LGC8 479 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 FAM83AQ86UY5 434 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 TM6SF1Q9BZW5 370 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 DHX36Q9H2U1 1008 aaKnown RBP15.86■□□□□ 0.13
CLK4-210ENST00000522136 ZSWIM6Q9HCJ5 1215 aa15.86■□□□□ 0.13
CLK4-210ENST00000522136 IQCA1LA6NCM1 817 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 HLA-DOAP06340 250 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 RABEP1Q15276 862 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 PRAMEF18Q5VWM3 479 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 BLOC1S2Q6QNY1 142 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 NCOA7Q8NI08 942 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 DEFB129Q9H1M3 183 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLK4-210ENST00000522136 ATRNL1Q5VV63 1379 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 ROBO3Q96MS0 1386 aa15.85■□□□□ 0.13
CLK4-210ENST00000522136 SLC3A2P08195 630 aaKnown RBP15.84■□□□□ 0.13
CLK4-210ENST00000522136 TNNI2P48788 182 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 CDK8P49336 464 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 GABPAQ06546 454 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 TRDNQ13061 729 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 C16orf86Q6ZW13 317 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 USP50Q70EL3 339 aaPredicted RBP15.84■□□□□ 0.13
CLK4-210ENST00000522136 RUFY3Q7L099 469 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 CYB5R4Q7L1T6 521 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 CSRNP1Q96S65 589 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 RNF41Q9H4P4 317 aaPredicted RBP15.84■□□□□ 0.13
CLK4-210ENST00000522136 PI4KBQ9UBF8 816 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 PGAP2Q9UHJ9 254 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 KDM4AO75164 1064 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 CD2BP2O95400 341 aaKnown RBP15.84■□□□□ 0.13
CLK4-210ENST00000522136 FGRP09769 529 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 RPS6KB1P23443 525 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 TNFAIP1Q13829 316 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 DLK2Q6UY11 383 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 RALYLQ86SE5 291 aaKnown RBP15.84■□□□□ 0.13
CLK4-210ENST00000522136 MB21D2Q8IYB1 491 aaPredicted RBP15.84■□□□□ 0.13
CLK4-210ENST00000522136 TEPSINQ96N21 525 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 LRRC2Q9BYS8 371 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 SERPINB13Q9UIV8 391 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 CYP46A1Q9Y6A2 500 aa15.84■□□□□ 0.13
CLK4-210ENST00000522136 POTEIP0CG38 1075 aa15.83■□□□□ 0.12
CLK4-210ENST00000522136 POTEJP0CG39 1038 aa15.83■□□□□ 0.12
CLK4-210ENST00000522136 PDE4BQ07343 736 aa15.83■□□□□ 0.12
CLK4-210ENST00000522136 APOBEC3FQ8IUX4 373 aaKnown RBP15.83■□□□□ 0.12
CLK4-210ENST00000522136 DNAJC18Q9H819 358 aa15.83■□□□□ 0.12
CLK4-210ENST00000522136 MKNK2Q9HBH9 465 aa15.83■□□□□ 0.12
CLK4-210ENST00000522136 NMRK2Q9NPI5 230 aa15.83■□□□□ 0.12
CLK4-210ENST00000522136 ZSWIM5Q9P217 1185 aa15.83■□□□□ 0.12
CLK4-210ENST00000522136 COL2A1P02458 1487 aaPredicted RBP15.83■□□□□ 0.12
CLK4-210ENST00000522136 ORC4O43929 436 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 RANBP6O60518 1105 aaKnown RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 ANTXR2P58335 489 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 EXOSC10Q01780 885 aaKnown RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 FAM47AQ5JRC9 791 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 DHX32Q7L7V1 743 aaKnown RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 CRACR2BQ8N4Y2 399 aaPredicted RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 LARP6Q9BRS8 491 aaKnown RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 KRT23Q9C075 422 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 CNNM2Q9H8M5 875 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 PDRG1Q9NUG6 133 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 VEGFAP15692 232 aaPredicted RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 RASA1P20936 1047 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 MIGA2Q7L4E1 593 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 FOXP4Q8IVH2 680 aaPredicted RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 DCPSQ96C86 337 aaKnown RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 TTC14Q96N46 770 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 EHD4Q9H223 541 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 GPHNQ9NQX3 736 aaPredicted RBP15.82■□□□□ 0.12
CLK4-210ENST00000522136 MYH8P13535 1937 aa15.82■□□□□ 0.12
CLK4-210ENST00000522136 ADM5C9JUS6 153 aa15.81■□□□□ 0.12
CLK4-210ENST00000522136 PRC1O43663 620 aa15.81■□□□□ 0.12
CLK4-210ENST00000522136 HMGB1P09429 215 aaKnown RBP15.81■□□□□ 0.12
CLK4-210ENST00000522136 SHMT1P34896 483 aa15.81■□□□□ 0.12
CLK4-210ENST00000522136 NBPF12Q5TAG4 269 aaPredicted RBP15.81■□□□□ 0.12
CLK4-210ENST00000522136 NOL8Q76FK4 1167 aaKnown RBP15.81■□□□□ 0.12
CLK4-210ENST00000522136 ZKSCAN3Q9BRR0 538 aa15.81■□□□□ 0.12
CLK4-210ENST00000522136 PCP11498 1178 aaKnown RBP15.8■□□□□ 0.12
CLK4-210ENST00000522136 MCM5P33992 734 aa15.8■□□□□ 0.12
CLK4-210ENST00000522136 PNMA8AQ86V59 439 aaPredicted RBP15.8■□□□□ 0.12
CLK4-210ENST00000522136 ESR2Q92731 530 aa15.8■□□□□ 0.12
CLK4-210ENST00000522136 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
CLK4-210ENST00000522136 AK2P54819 239 aa15.8■□□□□ 0.12
CLK4-210ENST00000522136 TFAP4Q01664 338 aa15.8■□□□□ 0.12
CLK4-210ENST00000522136 KRT26Q7Z3Y9 468 aa15.8■□□□□ 0.12
CLK4-210ENST00000522136 METTL16Q86W50 562 aaKnown RBP15.8■□□□□ 0.12
CLK4-210ENST00000522136 ZNF444Q8N0Y2 327 aaPredicted RBP15.8■□□□□ 0.12
CLK4-210ENST00000522136 ZC3H15Q8WU90 426 aaKnown RBP15.8■□□□□ 0.12
CLK4-210ENST00000522136 TRIM34Q9BYJ4 488 aa15.8■□□□□ 0.12
CLK4-210ENST00000522136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLK4-210ENST00000522136 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
CLK4-210ENST00000522136 NMT2O60551 498 aa15.79■□□□□ 0.12
CLK4-210ENST00000522136 SHROOM1Q2M3G4 852 aaPredicted RBP15.79■□□□□ 0.12
CLK4-210ENST00000522136 Q6ZUG5 572 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms