RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 AK2P54819 239 aa25.26■■□□□ 1.63
R3HCC1-208ENST00000522012 EXOSC10Q01780 885 aaKnown RBP25.26■■□□□ 1.63
R3HCC1-208ENST00000522012 DICER1Q9UPY3 1922 aaKnown RBP25.26■■□□□ 1.63
R3HCC1-208ENST00000522012 KDM4AO75164 1064 aa25.25■■□□□ 1.63
R3HCC1-208ENST00000522012 HLA-DOAP06340 250 aa25.25■■□□□ 1.63
R3HCC1-208ENST00000522012 SLC4A3P48751 1232 aa25.25■■□□□ 1.63
R3HCC1-208ENST00000522012 FGD1P98174 961 aa25.25■■□□□ 1.63
R3HCC1-208ENST00000522012 NKX2-3Q8TAU0 364 aa25.25■■□□□ 1.63
R3HCC1-208ENST00000522012 LRRC2Q9BYS8 371 aa25.25■■□□□ 1.63
R3HCC1-208ENST00000522012 ZC3H4Q9UPT8 1303 aaKnown RBP25.25■■□□□ 1.63
R3HCC1-208ENST00000522012 PRC1O43663 620 aa25.24■■□□□ 1.63
R3HCC1-208ENST00000522012 FGRP09769 529 aa25.24■■□□□ 1.63
R3HCC1-208ENST00000522012 MCM2P49736 904 aa25.24■■□□□ 1.63
R3HCC1-208ENST00000522012 Q6ZUG5 572 aa25.24■■□□□ 1.63
R3HCC1-208ENST00000522012 CYB5R4Q7L1T6 521 aa25.24■■□□□ 1.63
R3HCC1-208ENST00000522012 DHX36Q9H2U1 1008 aaKnown RBP25.24■■□□□ 1.63
R3HCC1-208ENST00000522012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.24■■□□□ 1.63
R3HCC1-208ENST00000522012 TIAM2Q8IVF5 1701 aa25.24■■□□□ 1.63
R3HCC1-208ENST00000522012 ESR2Q92731 530 aa25.23■■□□□ 1.63
R3HCC1-208ENST00000522012 LARP6Q9BRS8 491 aaKnown RBP25.23■■□□□ 1.63
R3HCC1-208ENST00000522012 MKNK2Q9HBH9 465 aa25.23■■□□□ 1.63
R3HCC1-208ENST00000522012 ZSWIM5Q9P217 1185 aa25.23■■□□□ 1.63
R3HCC1-208ENST00000522012 ROBO3Q96MS0 1386 aa25.23■■□□□ 1.63
R3HCC1-208ENST00000522012 DDTLA6NHG4 134 aaPredicted RBP25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 K7ELQ4 463 aaPredicted RBP25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 ORC4O43929 436 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 RANBP6O60518 1105 aaKnown RBP25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 ANTXR2P58335 489 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 FKBP1CQ5VVH2 108 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 TRPM4Q8TD43 1214 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 ALDH8A1Q9H2A2 487 aaPredicted RBP25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 ANKRD1Q15327 319 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 C16orf86Q6ZW13 317 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 SH3BP5LQ7L8J4 393 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 SLC44A5Q8NCS7 719 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 FAM151AQ8WW52 585 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 ZNF287Q9HBT7 754 aa25.22■■□□□ 1.63
R3HCC1-208ENST00000522012 NAV1Q8NEY1 1877 aa25.21■■□□□ 1.63
R3HCC1-208ENST00000522012 BAZ2AQ9UIF9 1905 aaKnown RBP25.21■■□□□ 1.63
R3HCC1-208ENST00000522012 LAMA4Q16363 1823 aa25.21■■□□□ 1.63
R3HCC1-208ENST00000522012 CDK8P49336 464 aa25.21■■□□□ 1.63
R3HCC1-208ENST00000522012 SERPINB13Q9UIV8 391 aa25.21■■□□□ 1.63
R3HCC1-208ENST00000522012 ASTN2O75129 1339 aaPredicted RBP25.21■■□□□ 1.63
R3HCC1-208ENST00000522012 WDR19Q8NEZ3 1342 aa25.21■■□□□ 1.63
R3HCC1-208ENST00000522012 GLTPD2A6NH11 291 aa25.2■■□□□ 1.62
R3HCC1-208ENST00000522012 TNNI2P48788 182 aa25.2■■□□□ 1.62
R3HCC1-208ENST00000522012 TOB2Q14106 344 aaPredicted RBP25.2■■□□□ 1.62
R3HCC1-208ENST00000522012 ADARB2Q9NS39 739 aaKnown RBP25.2■■□□□ 1.62
R3HCC1-208ENST00000522012 PI4KBQ9UBF8 816 aa25.2■■□□□ 1.62
R3HCC1-208ENST00000522012 HACL1Q9UJ83 578 aa25.2■■□□□ 1.62
R3HCC1-208ENST00000522012 LIMCH1Q9UPQ0 1083 aa25.2■■□□□ 1.62
R3HCC1-208ENST00000522012 CNTNAP1P78357 1384 aa25.2■■□□□ 1.62
R3HCC1-208ENST00000522012 FAM83AQ86UY5 434 aa25.19■■□□□ 1.62
R3HCC1-208ENST00000522012 ZNF444Q8N0Y2 327 aaPredicted RBP25.19■■□□□ 1.62
R3HCC1-208ENST00000522012 CRACR2BQ8N4Y2 399 aaPredicted RBP25.19■■□□□ 1.62
R3HCC1-208ENST00000522012 BRF1Q92994 677 aa25.19■■□□□ 1.62
R3HCC1-208ENST00000522012 TNFAIP1Q13829 316 aa25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 FAM47AQ5JRC9 791 aa25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 L3MBTL3Q96JM7 780 aaPredicted RBP25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 ZKSCAN3Q9BRR0 538 aa25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 TRIM34Q9BYJ4 488 aa25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 EHD4Q9H223 541 aa25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 GPHNQ9NQX3 736 aaPredicted RBP25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 SCAF8Q9UPN6 1271 aaKnown RBP25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 DDX60LQ5H9U9 1706 aaKnown RBP25.18■■□□□ 1.62
R3HCC1-208ENST00000522012 TSPY2A6NKD2 308 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 IFIT3O14879 490 aaKnown RBP25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 HIRAP54198 1017 aaPredicted RBP25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 GABPAQ06546 454 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 TMX3Q96JJ7 454 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 TMEM87BQ96K49 555 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 CSRNP1Q96S65 589 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 TMEM39BQ9GZU3 492 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 SWAP70Q9UH65 585 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 ATRNL1Q5VV63 1379 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 CDK5RAP2Q96SN8 1893 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 TFAP4Q01664 338 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 RASA3Q14644 834 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 TMEM67Q5HYA8 995 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 ANGEL2Q5VTE6 544 aaKnown RBP25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 FOXP4Q8IVH2 680 aaPredicted RBP25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 UBAC1Q9BSL1 405 aa25.17■■□□□ 1.62
R3HCC1-208ENST00000522012 COL2A1P02458 1487 aaPredicted RBP25.16■■□□□ 1.62
R3HCC1-208ENST00000522012 RASA1P20936 1047 aa25.16■■□□□ 1.62
R3HCC1-208ENST00000522012 SART3Q15020 963 aaKnown RBP25.16■■□□□ 1.62
R3HCC1-208ENST00000522012 FOCADQ5VW36 1801 aa25.16■■□□□ 1.62
R3HCC1-208ENST00000522012 AGXT2Q9BYV1 514 aa25.16■■□□□ 1.62
R3HCC1-208ENST00000522012 TPCN1Q9ULQ1 816 aa25.16■■□□□ 1.62
R3HCC1-208ENST00000522012 ECM29Q5VYK3 1845 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 LAMB1P07942 1786 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 ERICH2A1L162 156 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 SH2B2O14492 632 aaPredicted RBP25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 SLURP2P0DP57 97 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 NT5C2P49902 561 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 APOBRQ0VD83 1088 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 IQCA1Q86XH1 822 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 FBXL16Q8N461 479 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 SPRYD3Q8NCJ5 442 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 IGDCC4Q8TDY8 1250 aa25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 ZSCAN31Q96LW9 406 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms