RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SLURP2P0DP57 97 aa28.73■■■□□ 2.19
PVT1-212ENST00000521951 CDCA5Q96FF9 252 aa28.73■■■□□ 2.19
PVT1-212ENST00000521951 DYNLL2Q96FJ2 89 aa28.73■■■□□ 2.19
PVT1-212ENST00000521951 NBPF3Q9H094 633 aa28.73■■■□□ 2.19
PVT1-212ENST00000521951 EHD4Q9H223 541 aa28.73■■■□□ 2.19
PVT1-212ENST00000521951 HSPA4P34932 840 aa28.72■■■□□ 2.19
PVT1-212ENST00000521951 SUPT20HL1Q3ZLR7 823 aa28.72■■■□□ 2.19
PVT1-212ENST00000521951 METTL16Q86W50 562 aaKnown RBP28.72■■■□□ 2.19
PVT1-212ENST00000521951 STK11IPQ8N1F8 1099 aa28.72■■■□□ 2.19
PVT1-212ENST00000521951 SERPINB13Q9UIV8 391 aa28.72■■■□□ 2.19
PVT1-212ENST00000521951 TRAF5O00463 557 aa28.71■■■□□ 2.19
PVT1-212ENST00000521951 GABPAQ06546 454 aa28.71■■■□□ 2.19
PVT1-212ENST00000521951 ROBO3Q96MS0 1386 aa28.71■■■□□ 2.19
PVT1-212ENST00000521951 ITGBL1O95965 494 aaPredicted RBP28.7■■■□□ 2.19
PVT1-212ENST00000521951 MIGA2Q7L4E1 593 aa28.7■■■□□ 2.19
PVT1-212ENST00000521951 CRACR2BQ8N4Y2 399 aaPredicted RBP28.7■■■□□ 2.19
PVT1-212ENST00000521951 TACC3Q9Y6A5 838 aa28.7■■■□□ 2.19
PVT1-212ENST00000521951 TAF6LQ9Y6J9 622 aa28.7■■■□□ 2.19
PVT1-212ENST00000521951 MAP3K10Q02779 954 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 FMR1Q06787 632 aaKnown RBP eCLIP28.69■■■□□ 2.18
PVT1-212ENST00000521951 RNF20Q5VTR2 975 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 C16orf86Q6ZW13 317 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 TBC1D10CQ8IV04 446 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 HOOK2Q96ED9 719 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 DNAJC18Q9H819 358 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 HERC5Q9UII4 1024 aaKnown RBP28.69■■■□□ 2.18
PVT1-212ENST00000521951 FAM196BA6NMK8 535 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 TBC1D12O60347 775 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 TOMM70O94826 608 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 SLC3A2P08195 630 aaKnown RBP28.69■■■□□ 2.18
PVT1-212ENST00000521951 KCNB2Q92953 911 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 INCENPQ9NQS7 918 aa28.69■■■□□ 2.18
PVT1-212ENST00000521951 SSC5DA1L4H1 1573 aa28.68■■■□□ 2.18
PVT1-212ENST00000521951 MCCP23508 829 aa28.68■■■□□ 2.18
PVT1-212ENST00000521951 CDK8P49336 464 aa28.68■■■□□ 2.18
PVT1-212ENST00000521951 AKNAD1Q5T1N1 836 aa28.68■■■□□ 2.18
PVT1-212ENST00000521951 RASEFQ8IZ41 740 aa28.68■■■□□ 2.18
PVT1-212ENST00000521951 SLC44A5Q8NCS7 719 aa28.68■■■□□ 2.18
PVT1-212ENST00000521951 RBM46Q8TBY0 533 aaKnown RBP28.68■■■□□ 2.18
PVT1-212ENST00000521951 TRIM34Q9BYJ4 488 aa28.68■■■□□ 2.18
PVT1-212ENST00000521951 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.68■■■□□ 2.183e-9■■■■□ 26.1
PVT1-212ENST00000521951 SMC1BQ8NDV3 1235 aa28.67■■■□□ 2.18
PVT1-212ENST00000521951 STAG1Q8WVM7 1258 aa28.67■■■□□ 2.18
PVT1-212ENST00000521951 SWAP70Q9UH65 585 aa28.67■■■□□ 2.18
PVT1-212ENST00000521951 TAOK2Q9UL54 1235 aa28.67■■■□□ 2.18
PVT1-212ENST00000521951 PDE4BQ07343 736 aa28.66■■■□□ 2.18
PVT1-212ENST00000521951 DCAF15Q66K64 600 aa28.66■■■□□ 2.18
PVT1-212ENST00000521951 UPF2Q9HAU5 1272 aaKnown RBP28.66■■■□□ 2.18
PVT1-212ENST00000521951 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.66■■■□□ 2.18
PVT1-212ENST00000521951 FGRP09769 529 aa28.65■■■□□ 2.18
PVT1-212ENST00000521951 SHMT1P34896 483 aa28.65■■■□□ 2.18
PVT1-212ENST00000521951 NF2P35240 595 aa28.65■■■□□ 2.18
PVT1-212ENST00000521951 TSGA10IPQ3SY00 556 aa28.65■■■□□ 2.18
PVT1-212ENST00000521951 MFSD6Q6ZSS7 791 aa28.65■■■□□ 2.18
PVT1-212ENST00000521951 SNX14Q9Y5W7 946 aa28.65■■■□□ 2.18
PVT1-212ENST00000521951 MYH8P13535 1937 aa28.65■■■□□ 2.18
PVT1-212ENST00000521951 E7EWF7 191 aa28.64■■■□□ 2.18
PVT1-212ENST00000521951 PRDM1O75626 825 aa28.64■■■□□ 2.18
PVT1-212ENST00000521951 ZKSCAN1P17029 563 aaPredicted RBP28.64■■■□□ 2.18
PVT1-212ENST00000521951 STOX1Q6ZVD7 989 aa28.64■■■□□ 2.18
PVT1-212ENST00000521951 C22orf23Q9BZE7 217 aa28.64■■■□□ 2.18
PVT1-212ENST00000521951 RNF41Q9H4P4 317 aaPredicted RBP28.64■■■□□ 2.18
PVT1-212ENST00000521951 MKNK2Q9HBH9 465 aa28.64■■■□□ 2.18
PVT1-212ENST00000521951 FZD1Q9UP38 647 aa28.64■■■□□ 2.18
PVT1-212ENST00000521951 TATDN1Q6P1N9 297 aa28.64■■■□□ 2.17
PVT1-212ENST00000521951 ZNF341Q9BYN7 854 aa28.64■■■□□ 2.17
PVT1-212ENST00000521951 PCP11498 1178 aaKnown RBP28.63■■■□□ 2.17
PVT1-212ENST00000521951 PRKG1Q13976 671 aa28.63■■■□□ 2.17
PVT1-212ENST00000521951 ZNF408Q9H9D4 720 aa28.63■■■□□ 2.17
PVT1-212ENST00000521951 ZNF287Q9HBT7 754 aa28.63■■■□□ 2.17
PVT1-212ENST00000521951 ORC4O43929 436 aa28.62■■■□□ 2.17
PVT1-212ENST00000521951 USP2O75604 605 aaPredicted RBP28.62■■■□□ 2.17
PVT1-212ENST00000521951 NEDD4P46934 1319 aa28.62■■■□□ 2.17
PVT1-212ENST00000521951 TRPM7Q96QT4 1865 aa28.61■■■□□ 2.17
PVT1-212ENST00000521951 PHF20L1A8MW92 1017 aa28.61■■■□□ 2.17
PVT1-212ENST00000521951 PPP1R12BO60237 982 aaPredicted RBP28.61■■■□□ 2.17
PVT1-212ENST00000521951 RASA1P20936 1047 aa28.61■■■□□ 2.17
PVT1-212ENST00000521951 TOMM22Q9NS69 142 aa28.61■■■□□ 2.17
PVT1-212ENST00000521951 PASKQ96RG2 1323 aa28.61■■■□□ 2.17
PVT1-212ENST00000521951 RRP1BQ14684 758 aaKnown RBP28.6■■■□□ 2.17
PVT1-212ENST00000521951 RRP12Q5JTH9 1297 aaKnown RBP28.6■■■□□ 2.17
PVT1-212ENST00000521951 ZNF112Q9UJU3 913 aa28.6■■■□□ 2.17
PVT1-212ENST00000521951 CELF2O95319 508 aaKnown RBP28.59■■■□□ 2.17
PVT1-212ENST00000521951 KRT32Q14532 448 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 ADCK5Q3MIX3 580 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 CERKLQ49MI3 558 aaPredicted RBP28.59■■■□□ 2.17
PVT1-212ENST00000521951 ZNF444Q8N0Y2 327 aaPredicted RBP28.59■■■□□ 2.17
PVT1-212ENST00000521951 NKX2-3Q8TAU0 364 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 KLRG1Q96E93 195 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 CNNM2Q9H8M5 875 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 RBM25P49756 843 aaKnown RBP28.59■■■□□ 2.17
PVT1-212ENST00000521951 ANAPC15P60006 121 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 FSTL1Q12841 308 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 TRDNQ13061 729 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 KRT23Q9C075 422 aa28.59■■■□□ 2.17
PVT1-212ENST00000521951 B4E1Z4 1266 aa28.58■■■□□ 2.17
PVT1-212ENST00000521951 RANBP6O60518 1105 aaKnown RBP28.58■■■□□ 2.17
PVT1-212ENST00000521951 TTLL12Q14166 644 aaPredicted RBP28.58■■■□□ 2.17
PVT1-212ENST00000521951 CST9Q5W186 159 aa28.58■■■□□ 2.17
PVT1-212ENST00000521951 MOB2Q70IA6 237 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms