RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 RRP1BQ14684 758 aaKnown RBP21.7■■□□□ 1.06
TRAPPC9-211ENST00000521700 CERS3Q8IU89 383 aa21.7■■□□□ 1.06
TRAPPC9-211ENST00000521700 RIOK1Q9BRS2 568 aaKnown RBP21.7■■□□□ 1.06
TRAPPC9-211ENST00000521700 ZFYVE28Q9HCC9 887 aa21.7■■□□□ 1.06
TRAPPC9-211ENST00000521700 HERC5Q9UII4 1024 aaKnown RBP21.7■■□□□ 1.06
TRAPPC9-211ENST00000521700 SIPA1L1O43166 1804 aa21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 TCRBV5S4A2TA0A5A2 114 aa21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 MOGSQ13724 837 aa21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 FOXP4Q8IVH2 680 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 ZCCHC17Q9NP64 241 aaKnown RBP21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 SAP30BPQ9UHR5 308 aaKnown RBP21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 AFG3L2Q9Y4W6 797 aa21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 ZNF532Q9HCE3 1301 aa21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 DOCK1Q14185 1865 aa21.69■■□□□ 1.06
TRAPPC9-211ENST00000521700 USP5P45974 858 aa21.68■■□□□ 1.06
TRAPPC9-211ENST00000521700 METTL16Q86W50 562 aaKnown RBP21.68■■□□□ 1.06
TRAPPC9-211ENST00000521700 ECHDC1Q9NTX5 307 aa21.68■■□□□ 1.06
TRAPPC9-211ENST00000521700 MAGEB6P1A0A0J9YX57 407 aa21.67■■□□□ 1.06
TRAPPC9-211ENST00000521700 CCDC85CA6NKD9 419 aa21.67■■□□□ 1.06
TRAPPC9-211ENST00000521700 CAP2P40123 477 aa21.67■■□□□ 1.06
TRAPPC9-211ENST00000521700 ANKRD23Q86SG2 305 aa21.67■■□□□ 1.06
TRAPPC9-211ENST00000521700 CCDC84Q86UT8 332 aaPredicted RBP21.67■■□□□ 1.06
TRAPPC9-211ENST00000521700 PHIPQ8WWQ0 1821 aa21.66■■□□□ 1.06
TRAPPC9-211ENST00000521700 SP3Q02447 781 aa21.66■■□□□ 1.06
TRAPPC9-211ENST00000521700 PKN2Q16513 984 aaKnown RBP21.66■■□□□ 1.06
TRAPPC9-211ENST00000521700 SLFNL1Q499Z3 407 aa21.66■■□□□ 1.06
TRAPPC9-211ENST00000521700 DNAJC18Q9H819 358 aa21.66■■□□□ 1.06
TRAPPC9-211ENST00000521700 MYH1P12882 1939 aa21.66■■□□□ 1.06
TRAPPC9-211ENST00000521700 A0A0G2JLL6 359 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC9-211ENST00000521700 ADD2P35612 726 aa21.65■■□□□ 1.06
TRAPPC9-211ENST00000521700 SLC4A8Q2Y0W8 1093 aa21.65■■□□□ 1.06
TRAPPC9-211ENST00000521700 GPAT2Q6NUI2 795 aa21.65■■□□□ 1.06
TRAPPC9-211ENST00000521700 PRRT2Q7Z6L0 340 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC9-211ENST00000521700 CD99L2Q8TCZ2 262 aa21.65■■□□□ 1.06
TRAPPC9-211ENST00000521700 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
TRAPPC9-211ENST00000521700 PDHXO00330 501 aa21.64■■□□□ 1.05
TRAPPC9-211ENST00000521700 TLR2O60603 784 aa21.64■■□□□ 1.05
TRAPPC9-211ENST00000521700 CHGBP05060 677 aa21.64■■□□□ 1.05
TRAPPC9-211ENST00000521700 HLA-DOAP06340 250 aa21.64■■□□□ 1.05
TRAPPC9-211ENST00000521700 CRACR2BQ8N4Y2 399 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC9-211ENST00000521700 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.64■■□□□ 1.05
TRAPPC9-211ENST00000521700 TRIM75PA6NK02 468 aa21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 JAG1P78504 1218 aa21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 CAP1Q01518 475 aa21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 FASTKD5Q7L8L6 764 aaKnown RBP21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 LCORLQ8N3X6 602 aa21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 TRIM34Q9BYJ4 488 aa21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 CRNKL1Q9BZJ0 848 aaKnown RBP21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 ATAD5Q96QE3 1844 aa21.63■■□□□ 1.05
TRAPPC9-211ENST00000521700 HDAC1Q13547 482 aaPredicted RBP21.62■■□□□ 1.05
TRAPPC9-211ENST00000521700 OTOP1Q7RTM1 612 aa21.62■■□□□ 1.05
TRAPPC9-211ENST00000521700 GPATCH3Q96I76 525 aa21.62■■□□□ 1.05
TRAPPC9-211ENST00000521700 ARMT1Q9H993 441 aa21.62■■□□□ 1.05
TRAPPC9-211ENST00000521700 HPS5Q9UPZ3 1129 aa21.62■■□□□ 1.05
TRAPPC9-211ENST00000521700 TRIM17Q9Y577 477 aa21.62■■□□□ 1.05
TRAPPC9-211ENST00000521700 PTPRFP10586 1907 aa21.62■■□□□ 1.05
TRAPPC9-211ENST00000521700 USP17L5A8MUK1 530 aa21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 SPP2Q13103 211 aa21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 UBE3CQ15386 1083 aa21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 FBXO46Q6PJ61 603 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 C17orf99Q6UX52 265 aa21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 GADL1Q6ZQY3 521 aa21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 TTC6Q86TZ1 520 aa21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 ZNF280CQ8ND82 737 aa21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 OTUD7AQ8TE49 926 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC9-211ENST00000521700 PLCD1P51178 756 aa21.6■■□□□ 1.05
TRAPPC9-211ENST00000521700 AAMPQ13685 434 aa21.6■■□□□ 1.05
TRAPPC9-211ENST00000521700 SHROOM1Q2M3G4 852 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC9-211ENST00000521700 SDR42E1Q8WUS8 393 aa21.6■■□□□ 1.05
TRAPPC9-211ENST00000521700 TBC1D2Q9BYX2 928 aa21.6■■□□□ 1.05
TRAPPC9-211ENST00000521700 EHD4Q9H223 541 aa21.6■■□□□ 1.05
TRAPPC9-211ENST00000521700 SERPINB13Q9UIV8 391 aa21.6■■□□□ 1.05
TRAPPC9-211ENST00000521700 MYH7P12883 1935 aa21.6■■□□□ 1.05
TRAPPC9-211ENST00000521700 ADGRA2Q96PE1 1338 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 MBD4O95243 580 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 GDF11O95390 407 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 ASNSP08243 561 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 ANKRD45Q5TZF3 282 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 ZSCAN25Q6NSZ9 544 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 TATDN1Q6P1N9 297 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 EFCC1Q9HA90 598 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 DCP1AQ9NPI6 582 aaPredicted RBP21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 MCM9Q9NXL9 1143 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 CPA4Q9UI42 421 aa21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 SUPT16HQ9Y5B9 1047 aaKnown RBP21.59■■□□□ 1.05
TRAPPC9-211ENST00000521700 TTC41PQ6P2S7 1318 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 PRKAB2O43741 272 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 POLR3DP05423 398 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 CYP2C8P10632 490 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 KBTBD3Q8NAB2 608 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 EXOC6Q8TAG9 804 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 GCC1Q96CN9 775 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 WDR18Q9BV38 432 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 AS3MTQ9HBK9 375 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 GINM1Q9NU53 330 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 SLC45A1Q9Y2W3 748 aa21.58■■□□□ 1.05
TRAPPC9-211ENST00000521700 DDX60LQ5H9U9 1706 aaKnown RBP21.58■■□□□ 1.04
TRAPPC9-211ENST00000521700 EVX2Q03828 476 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms