RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 ZNF280CQ8ND82 737 aa14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 SLC17A8Q8NDX2 589 aa14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 SMC4Q9NTJ3 1288 aa14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 NOB1Q9ULX3 412 aaKnown RBP14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 AKAP2Q9Y2D5 859 aa14.26□□□□□ -0.13
IGHV3-60-201ENST00000521678 AK9Q5TCS8 1911 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 MGAMO43451 1857 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 RPTORQ8N122 1335 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 ZNF316A6NFI3 1004 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 HMGCRP04035 888 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 LDHCP07864 332 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 CT47B1P0C2W7 299 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 CAP2P40123 477 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 NSUN4Q96CB9 384 aaKnown RBP14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 LRCH3Q96II8 777 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 API5Q9BZZ5 524 aaKnown RBP14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 ASCC2Q9H1I8 757 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 HMG20BQ9P0W2 317 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 MORF4L1Q9UBU8 362 aa14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-60-201ENST00000521678 FAM196BA6NMK8 535 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 USP17L5A8MUK1 530 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 DLL1O00548 723 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 TFCP2Q12800 502 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 MAP3K21Q5TCX8 1036 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 MEIS3Q99687 375 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 WDR18Q9BV38 432 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 NBPF3Q9H094 633 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 HMX1Q9NP08 348 aaPredicted RBP14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 OGDHLQ9ULD0 1010 aa14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 COL2A1P02458 1487 aaPredicted RBP14.24□□□□□ -0.13
IGHV3-60-201ENST00000521678 PHIPQ8WWQ0 1821 aa14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 LAMA2P24043 3122 aaKnown RBP14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 HOXA7P31268 230 aaPredicted RBP14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 HMGCS2P54868 508 aa14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 GSTO1P78417 241 aa14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 TRIM32Q13049 653 aa14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 TBC1D9Q6ZT07 1266 aa14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 METTL16Q86W50 562 aaKnown RBP14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 HERC5Q9UII4 1024 aaKnown RBP14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 DOCK3Q8IZD9 2030 aa14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 MYH2Q9UKX2 1941 aa14.23□□□□□ -0.13
IGHV3-60-201ENST00000521678 MYH13Q9UKX3 1938 aa14.22□□□□□ -0.13
IGHV3-60-201ENST00000521678 XRCC5P13010 732 aaKnown RBP14.22□□□□□ -0.13
IGHV3-60-201ENST00000521678 SPATA5Q8NB90 893 aa14.22□□□□□ -0.13
IGHV3-60-201ENST00000521678 ARHGAP45Q92619 1136 aa14.22□□□□□ -0.13
IGHV3-60-201ENST00000521678 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
IGHV3-60-201ENST00000521678 TAOK2Q9UL54 1235 aa14.22□□□□□ -0.13
IGHV3-60-201ENST00000521678 DNAH12Q6ZR08 3092 aa14.22□□□□□ -0.13
IGHV3-60-201ENST00000521678 PTPRFP10586 1907 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 DOCK2Q92608 1830 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 SRGAP3O43295 1099 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 ARID4AP29374 1257 aaPredicted RBP14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 BACE1P56817 501 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 PPP4CP60510 307 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 JAG1P78504 1218 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 LRIT3Q3SXY7 679 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 PI16Q6UXB8 463 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 USP6NLQ92738 828 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 NEUROD6Q96NK8 337 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 PI4KBQ9UBF8 816 aa14.21□□□□□ -0.13
IGHV3-60-201ENST00000521678 GNAI3P08754 354 aa14.2□□□□□ -0.14
IGHV3-60-201ENST00000521678 FOXP4Q8IVH2 680 aaPredicted RBP14.2□□□□□ -0.14
IGHV3-60-201ENST00000521678 TRIB2Q92519 343 aa14.2□□□□□ -0.14
IGHV3-60-201ENST00000521678 DHX36Q9H2U1 1008 aaKnown RBP14.2□□□□□ -0.14
IGHV3-60-201ENST00000521678 AS3MTQ9HBK9 375 aa14.2□□□□□ -0.14
IGHV3-60-201ENST00000521678 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
IGHV3-60-201ENST00000521678 ZMYND8Q9ULU4 1186 aaPredicted RBP14.2□□□□□ -0.14
IGHV3-60-201ENST00000521678 DOCK1Q14185 1865 aa14.2□□□□□ -0.14
IGHV3-60-201ENST00000521678 C19orf81C9J6K1 198 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 ASNSP08243 561 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 COL6A1P12109 1028 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 RARSP54136 660 aaKnown RBP14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 POTEEQ6S8J3 1075 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 TEX11Q8IYF3 940 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 C7orf61Q8IZ16 206 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 GPRC5AQ8NFJ5 357 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 SH3RF3Q8TEJ3 882 aaPredicted RBP14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 C11orf49Q9H6J7 331 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 TXNRD2Q9NNW7 524 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 GINM1Q9NU53 330 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 RAI14Q9P0K7 980 aa14.19□□□□□ -0.14
IGHV3-60-201ENST00000521678 CYP2B6P20813 491 aa14.18□□□□□ -0.14
IGHV3-60-201ENST00000521678 MCAMP43121 646 aa14.18□□□□□ -0.14
IGHV3-60-201ENST00000521678 MAGEA10P43363 369 aaPredicted RBP14.18□□□□□ -0.14
IGHV3-60-201ENST00000521678 HERVK_113P62684 666 aa14.18□□□□□ -0.14
IGHV3-60-201ENST00000521678 Q3C1V9 767 aa14.18□□□□□ -0.14
IGHV3-60-201ENST00000521678 LHX8Q68G74 356 aa14.18□□□□□ -0.14
IGHV3-60-201ENST00000521678 NUDT12Q9BQG2 462 aa14.18□□□□□ -0.14
IGHV3-60-201ENST00000521678 DNAJC18Q9H819 358 aa14.18□□□□□ -0.14
IGHV3-60-201ENST00000521678 UNC80Q8N2C7 3258 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 PFASO15067 1338 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 PEX10O60683 326 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms