RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 INPP5BP32019 993 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 TAF1CQ15572 869 aaPredicted RBP13.96□□□□□ -0.17
CSMD1-210ENST00000521646 HABP4Q5JVS0 413 aaKnown RBP13.96□□□□□ -0.17
CSMD1-210ENST00000521646 ATG9AQ7Z3C6 839 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 FAM9BQ8IZU0 186 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 SSH1Q8WYL5 1049 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 ZDHHC15Q96MV8 337 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 ADGRA2Q96PE1 1338 aa13.95□□□□□ -0.18
CSMD1-210ENST00000521646 PPP4CP60510 307 aa13.95□□□□□ -0.18
CSMD1-210ENST00000521646 NFIAQ12857 509 aa13.95□□□□□ -0.18
CSMD1-210ENST00000521646 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
CSMD1-210ENST00000521646 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
CSMD1-210ENST00000521646 ZFPM1Q8IX07 1006 aa13.95□□□□□ -0.18
CSMD1-210ENST00000521646 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
CSMD1-210ENST00000521646 MYH13Q9UKX3 1938 aa13.94□□□□□ -0.18
CSMD1-210ENST00000521646 TNFAIP1Q13829 316 aa13.94□□□□□ -0.18
CSMD1-210ENST00000521646 DIXDC1Q155Q3 683 aa13.94□□□□□ -0.18
CSMD1-210ENST00000521646 SHISA4Q96DD7 197 aa13.94□□□□□ -0.18
CSMD1-210ENST00000521646 WRNIP1Q96S55 665 aa13.94□□□□□ -0.18
CSMD1-210ENST00000521646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.94□□□□□ -0.18
CSMD1-210ENST00000521646 ATRNL1Q5VV63 1379 aa13.94□□□□□ -0.18
CSMD1-210ENST00000521646 TRIOBPQ9H2D6 2365 aa13.94□□□□□ -0.18
CSMD1-210ENST00000521646 PRDX5P30044 214 aa13.93□□□□□ -0.18
CSMD1-210ENST00000521646 GTF2A2P52657 109 aa13.93□□□□□ -0.18
CSMD1-210ENST00000521646 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
CSMD1-210ENST00000521646 INTS3Q68E01 1043 aaKnown RBP13.93□□□□□ -0.18
CSMD1-210ENST00000521646 TEKT1Q969V4 418 aa13.93□□□□□ -0.18
CSMD1-210ENST00000521646 DAGLAQ9Y4D2 1042 aa13.93□□□□□ -0.18
CSMD1-210ENST00000521646 TLR2O60603 784 aa13.92□□□□□ -0.18
CSMD1-210ENST00000521646 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
CSMD1-210ENST00000521646 LACTBP83111 547 aaPredicted RBP13.92□□□□□ -0.18
CSMD1-210ENST00000521646 MTFR1Q15390 333 aa13.92□□□□□ -0.18
CSMD1-210ENST00000521646 NYAP1Q6ZVC0 841 aa13.92□□□□□ -0.18
CSMD1-210ENST00000521646 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.92□□□□□ -0.18
CSMD1-210ENST00000521646 RPAP1Q9BWH6 1393 aaPredicted RBP13.92□□□□□ -0.18
CSMD1-210ENST00000521646 RNF40O75150 1001 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 TCP10Q12799 353 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 OTUD7BQ6GQQ9 843 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 CDC42EP5Q6NZY7 148 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 C17orf99Q6UX52 265 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 FAM83AQ86UY5 434 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 ERO1BQ86YB8 467 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.91□□□□□ -0.18
CSMD1-210ENST00000521646 ZFYVE28Q9HCC9 887 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 CPA4Q9UI42 421 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 ZNF112Q9UJU3 913 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 RFX7Q2KHR2 1363 aa13.91□□□□□ -0.18
CSMD1-210ENST00000521646 EYA2O00167 538 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 ANP32CO43423 234 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 ADORA1P30542 326 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 PPIL2Q13356 520 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 PUM3Q15397 648 aaKnown RBP13.9□□□□□ -0.18
CSMD1-210ENST00000521646 GPAT2Q6NUI2 795 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 VPS37DQ86XT2 251 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 TRIM47Q96LD4 638 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 MRIQ9BWK5 157 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 CSADQ9Y600 493 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 PHIPQ8WWQ0 1821 aa13.9□□□□□ -0.18
CSMD1-210ENST00000521646 KIF16BQ96L93 1317 aa13.9□□□□□ -0.19
CSMD1-210ENST00000521646 COL6A3P12111 3177 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 PHKA1P46020 1223 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 TNNI2P48788 182 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 SLC9C1Q4G0N8 1177 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 CAVIN4Q5BKX8 364 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 FKBP1CQ5VVH2 108 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 HHIPL2Q6UWX4 724 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 ZNF384Q8TF68 577 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 TBC1D22AQ8WUA7 517 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 KCNH4Q9UQ05 1017 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 PA2G4Q9UQ80 394 aaKnown RBP13.89□□□□□ -0.19
CSMD1-210ENST00000521646 PTPRFP10586 1907 aa13.89□□□□□ -0.19
CSMD1-210ENST00000521646 PHF20L1A8MW92 1017 aa13.88□□□□□ -0.19
CSMD1-210ENST00000521646 CETPP11597 493 aa13.88□□□□□ -0.19
CSMD1-210ENST00000521646 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
CSMD1-210ENST00000521646 CCDC84Q86UT8 332 aaPredicted RBP13.88□□□□□ -0.19
CSMD1-210ENST00000521646 SIL1Q9H173 461 aa13.88□□□□□ -0.19
CSMD1-210ENST00000521646 PTPRCP08575 1304 aa13.88□□□□□ -0.19
CSMD1-210ENST00000521646 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
CSMD1-210ENST00000521646 H0YGN5 161 aa13.87□□□□□ -0.19
CSMD1-210ENST00000521646 FRAT2O75474 233 aaPredicted RBP13.87□□□□□ -0.19
CSMD1-210ENST00000521646 CYP2C8P10632 490 aa13.87□□□□□ -0.19
CSMD1-210ENST00000521646 SNAPC2Q13487 334 aa13.87□□□□□ -0.19
CSMD1-210ENST00000521646 UBE2Q1Q7Z7E8 422 aa13.87□□□□□ -0.19
CSMD1-210ENST00000521646 FAM151AQ8WW52 585 aa13.87□□□□□ -0.19
CSMD1-210ENST00000521646 DDX4Q9NQI0 724 aaKnown RBP13.87□□□□□ -0.19
CSMD1-210ENST00000521646 MGAMO43451 1857 aa13.87□□□□□ -0.19
CSMD1-210ENST00000521646 MYH2Q9UKX2 1941 aa13.86□□□□□ -0.19
CSMD1-210ENST00000521646 PDHXO00330 501 aa13.86□□□□□ -0.19
CSMD1-210ENST00000521646 PPATQ06203 517 aa13.86□□□□□ -0.19
CSMD1-210ENST00000521646 SWT1Q5T5J6 900 aaKnown RBP13.86□□□□□ -0.19
CSMD1-210ENST00000521646 LPIN2Q92539 896 aa13.86□□□□□ -0.19
CSMD1-210ENST00000521646 ZNF341Q9BYN7 854 aa13.86□□□□□ -0.19
CSMD1-210ENST00000521646 GABRQQ9UN88 632 aa13.86□□□□□ -0.19
CSMD1-210ENST00000521646 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
CSMD1-210ENST00000521646 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
CSMD1-210ENST00000521646 DDTLA6NHG4 134 aaPredicted RBP13.85□□□□□ -0.19
CSMD1-210ENST00000521646 IFIT1P09914 478 aaKnown RBP13.85□□□□□ -0.19
CSMD1-210ENST00000521646 BCRP11274 1271 aa13.85□□□□□ -0.19
CSMD1-210ENST00000521646 PSMC4P43686 418 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms