RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 OAS3Q9Y6K5 1087 aaKnown RBP5.83□□□□□ -1.48
VPS13B-208ENST00000521037 MKI67P46013 3256 aaKnown RBP5.83□□□□□ -1.48
VPS13B-208ENST00000521037 KIF13BQ9NQT8 1826 aa5.83□□□□□ -1.48
VPS13B-208ENST00000521037 CPSF1Q10570 1443 aaKnown RBP5.82□□□□□ -1.48
VPS13B-208ENST00000521037 PPIP5K1Q6PFW1 1433 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 PAX4O43316 350 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 MICAL2O94851 1124 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 RASA1P20936 1047 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 TXKP42681 527 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 HFE2Q6ZVN8 426 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 KRT25Q7Z3Z0 450 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 ARHGEF25Q86VW2 580 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 NGDNQ8NEJ9 315 aaKnown RBP5.82□□□□□ -1.48
VPS13B-208ENST00000521037 NUDT16Q96DE0 195 aaKnown RBP5.82□□□□□ -1.48
VPS13B-208ENST00000521037 UBL7Q96S82 380 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-208ENST00000521037 C1orf115Q9H7X2 142 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 TFCP2L1Q9NZI6 479 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 NFAT5O94916 1531 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 RGPD5Q99666 1765 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 PKD1L3Q7Z443 1732 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 PIK3C2AO00443 1686 aa5.82□□□□□ -1.48
VPS13B-208ENST00000521037 BRCA1P38398 1863 aaKnown RBP5.81□□□□□ -1.48
VPS13B-208ENST00000521037 RARAP10276 462 aa5.81□□□□□ -1.48
VPS13B-208ENST00000521037 HOXD8P13378 290 aaPredicted RBP5.81□□□□□ -1.48
VPS13B-208ENST00000521037 EPB42P16452 691 aa5.81□□□□□ -1.48
VPS13B-208ENST00000521037 ARSDP51689 593 aa5.81□□□□□ -1.48
VPS13B-208ENST00000521037 TOM1L2Q6ZVM7 507 aa5.81□□□□□ -1.48
VPS13B-208ENST00000521037 KDM6AO15550 1401 aaPredicted RBP5.81□□□□□ -1.48
VPS13B-208ENST00000521037 LOC102724428A0A0B4J2F2 783 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 J3QW42 95 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 EXOC5O00471 708 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 LGR5O75473 907 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 HSPA8P11142 646 aaKnown RBP5.8□□□□□ -1.48
VPS13B-208ENST00000521037 TAL1P17542 331 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-208ENST00000521037 SIK1P57059 783 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 PTK7Q13308 1070 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 RGL3Q3MIN7 710 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 ARMC10Q8N2F6 343 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 ABTB2Q8N961 1025 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 MYO19Q96H55 970 aa5.8□□□□□ -1.48
VPS13B-208ENST00000521037 SRA1Q9HD15 236 aaKnown RBP5.8□□□□□ -1.48
VPS13B-208ENST00000521037 ITSN1Q15811 1721 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 COL6A3P12111 3177 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 TNRC6CQ9HCJ0 1690 aaKnown RBP5.79□□□□□ -1.48
VPS13B-208ENST00000521037 VIRMAQ69YN4 1812 aaKnown RBP5.79□□□□□ -1.48
VPS13B-208ENST00000521037 TGFB1P01137 390 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 IGLV1-40P01703 118 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 WEE1P30291 646 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 LBX1P52954 281 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 DGKZQ13574 1117 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 CRTC2Q53ET0 693 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-208ENST00000521037 C9orf131Q5VYM1 1079 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.79□□□□□ -1.48
VPS13B-208ENST00000521037 ZDHHC13Q8IUH4 622 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 WWC1Q8IX03 1113 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 PLD4Q96BZ4 506 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 TFIP11Q9UBB9 837 aaKnown RBP5.79□□□□□ -1.48
VPS13B-208ENST00000521037 LRFN2Q9ULH4 789 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 USP20Q9Y2K6 914 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 RAXQ9Y2V3 346 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 RTCBQ9Y3I0 505 aaKnown RBP5.79□□□□□ -1.48
VPS13B-208ENST00000521037 MAFBQ9Y5Q3 323 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-208ENST00000521037 KCNMB2Q9Y691 235 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 CNTNAP1P78357 1384 aa5.79□□□□□ -1.48
VPS13B-208ENST00000521037 EIF3AQ14152 1382 aaKnown RBP5.79□□□□□ -1.48
VPS13B-208ENST00000521037 N4BP2Q86UW6 1770 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-208ENST00000521037 PRR19A6NJB7 356 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 MMP20O60882 483 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 COBLO75128 1261 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 SPINK2P20155 84 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 IRAK1P51617 712 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 GP2P55259 537 aaKnown RBP5.78□□□□□ -1.48
VPS13B-208ENST00000521037 DPYDQ12882 1025 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 C11orf91Q3C1V1 193 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 NPM2Q86SE8 214 aaKnown RBP5.78□□□□□ -1.48
VPS13B-208ENST00000521037 AGGF1Q8N302 714 aaeCLIP5.78□□□□□ -1.48
VPS13B-208ENST00000521037 IL22RA1Q8N6P7 574 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 GALNT11Q8NCW6 608 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 SMC1BQ8NDV3 1235 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 ARID3AQ99856 593 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 HINFPQ9BQA5 517 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 NSD3Q9BZ95 1437 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 TRAK1Q9UPV9 953 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 ANKRD36BQ8N2N9 1353 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 CCDC7Q96M83 1385 aa5.78□□□□□ -1.48
VPS13B-208ENST00000521037 TAF1LQ8IZX4 1826 aa5.77□□□□□ -1.49
VPS13B-208ENST00000521037 SOX18P35713 384 aa5.77□□□□□ -1.49
VPS13B-208ENST00000521037 NLRP13Q86W25 1043 aa5.77□□□□□ -1.49
VPS13B-208ENST00000521037 MAP4K3Q8IVH8 894 aa5.77□□□□□ -1.49
VPS13B-208ENST00000521037 RBM19Q9Y4C8 960 aaKnown RBP5.77□□□□□ -1.49
VPS13B-208ENST00000521037 C5P01031 1676 aa5.77□□□□□ -1.49
VPS13B-208ENST00000521037 UBR3Q6ZT12 1888 aa5.77□□□□□ -1.49
VPS13B-208ENST00000521037 DOT1LQ8TEK3 1739 aa5.77□□□□□ -1.49
VPS13B-208ENST00000521037 PASKQ96RG2 1323 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 A0A0G2JLW4 131 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 LOC105371045A0A1W2PR82 267 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 GSC2O15499 205 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 WISP1O95388 367 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 EIF2AK2P19525 551 aaKnown RBP5.76□□□□□ -1.49
VPS13B-208ENST00000521037 CTCFP49711 727 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms