RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 SLC9A7Q96T83 725 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 ASPSCR1Q9BZE9 553 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 SH2B1Q9NRF2 756 aaPredicted RBP4.81□□□□□ -1.64
SREK1-208ENST00000520580 GSG1L2A8MUP6 293 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 SMNDC1O75940 238 aaKnown RBP eCLIP4.8□□□□□ -1.642e-7■□□□□ 8.7
SREK1-208ENST00000520580 CPB1P15086 417 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 NRLP54845 237 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 PPP4R4Q6NUP7 873 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 PDZD3Q86UT5 571 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 KLHL6Q8WZ60 621 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 ATG4CQ96DT6 458 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 SLC26A8Q96RN1 970 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 CHST12Q9NRB3 414 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 NOB1Q9ULX3 412 aaKnown RBP4.8□□□□□ -1.64
SREK1-208ENST00000520580 MRPS23Q9Y3D9 190 aaKnown RBP4.8□□□□□ -1.64
SREK1-208ENST00000520580 MEIS3P2A8K0S8 358 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 MAP3K6O95382 1288 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 IRX6P78412 446 aaPredicted RBP4.8□□□□□ -1.64
SREK1-208ENST00000520580 GPLD1P80108 840 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 UBE4AQ14139 1066 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 LRRFIP1Q32MZ4 808 aaKnown RBP4.8□□□□□ -1.64
SREK1-208ENST00000520580 TSHZ1Q6ZSZ6 1077 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 NLRC3Q7RTR2 1065 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 MYO1HQ8N1T3 1032 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 GPBAR1Q8TDU6 330 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 SLC7A3Q8WY07 619 aa4.8□□□□□ -1.64
SREK1-208ENST00000520580 SOS2Q07890 1332 aaPredicted RBP4.8□□□□□ -1.64
SREK1-208ENST00000520580 PRAMEF27A3QJZ7 478 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 RASGRP1O95267 797 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 TP53P04637 393 aaPredicted RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 NME1P15531 152 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 PLCG1P19174 1290 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 UBAP2LQ14157 1087 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 NCAPHQ15003 741 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 TDRD10Q5VZ19 366 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 SLC4A10Q6U841 1118 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 MICALL1Q8N3F8 863 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 ZNF669Q96BR6 464 aaPredicted RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 KIF2CQ99661 725 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 EMILIN2Q9BXX0 1053 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 UBE2OQ9C0C9 1292 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 NUCKS1Q9H1E3 243 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 PHAXQ9H814 394 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 ARHGEF4Q9NR80 690 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 GEMIN8Q9NWZ8 242 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 GMIPQ9P107 970 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 TRIM33Q9UPN9 1127 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 SLC12A7Q9Y666 1083 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 A0A1W2PQU0 124 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 SLC22A31A6NKX4 558 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 AKAP10O43572 662 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 EIF3JO75822 258 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 KRT18P05783 430 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 GSTP1P09211 210 aaKnown RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 ESRRAP11474 423 aaPredicted RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 PAX3P23760 479 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 PMLP29590 882 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 GRIA2P42262 883 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 SLC7A5Q01650 507 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 LRFN4Q6PJG9 635 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 FAM35AQ86V20 835 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 KISS1RQ969F8 398 aaPredicted RBP4.79□□□□□ -1.64
SREK1-208ENST00000520580 DHRS4Q9BTZ2 278 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 RUSC1Q9BVN2 902 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 LRP2BPQ9P2M1 347 aa4.79□□□□□ -1.64
SREK1-208ENST00000520580 IQCA1LA6NCM1 817 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 SOBPA7XYQ1 873 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 GFRA2O00451 464 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 KIF3BO15066 747 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 HOXD8P13378 290 aaPredicted RBP4.78□□□□□ -1.64
SREK1-208ENST00000520580 IKBKEQ14164 716 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 GDF6Q6KF10 455 aaPredicted RBP4.78□□□□□ -1.64
SREK1-208ENST00000520580 TXNDC11Q6PKC3 985 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 WDR66Q8TBY9 1149 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 ZFP42Q96MM3 310 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 DNAJB12Q9NXW2 375 aaKnown RBP4.78□□□□□ -1.64
SREK1-208ENST00000520580 SOX13Q9UN79 622 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 MAPRE3Q9UPY8 281 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 CSADQ9Y600 493 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 DCDC2CA8MYV0 355 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 AGRPO00253 132 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 PRPF3O43395 683 aaKnown RBP4.78□□□□□ -1.64
SREK1-208ENST00000520580 PLIN1O60240 522 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 EPHA1P21709 976 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 NEK2P51955 445 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 SCARF1Q14162 830 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 MLECQ14165 292 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 LONRF2Q1L5Z9 754 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 TRIM67Q6ZTA4 783 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 DDX46Q7L014 1031 aaKnown RBP4.78□□□□□ -1.64
SREK1-208ENST00000520580 CHPFQ8IZ52 775 aa4.78□□□□□ -1.64
SREK1-208ENST00000520580 RNF166Q96A37 237 aaPredicted RBP4.78□□□□□ -1.64
SREK1-208ENST00000520580 IPO9Q96P70 1041 aaKnown RBP4.78□□□□□ -1.64
SREK1-208ENST00000520580 PRR36Q9H6K5 1346 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 FAM83GA6ND36 823 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 CHURC1-FNTBB4DL54 471 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 PLD2O14939 933 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 CAND2O75155 1236 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 EYA4O95677 639 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 NEK4P51957 841 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms