RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 VIMP08670 466 aaKnown RBP13.52□□□□□ -0.24
ERGIC1-208ENST00000520399 UBXN1Q04323 297 aa13.52□□□□□ -0.24
ERGIC1-208ENST00000520399 DTHD1Q6ZMT9 781 aa13.52□□□□□ -0.24
ERGIC1-208ENST00000520399 BTG4Q9NY30 223 aa13.52□□□□□ -0.24
ERGIC1-208ENST00000520399 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.24
ERGIC1-208ENST00000520399 ARHGEF5Q12774 1597 aa13.52□□□□□ -0.25
ERGIC1-208ENST00000520399 CTAGE9A4FU28 777 aa13.52□□□□□ -0.25
ERGIC1-208ENST00000520399 TRIM6Q9C030 488 aaPredicted RBP13.52□□□□□ -0.25
ERGIC1-208ENST00000520399 PDE8AO60658 829 aa13.52□□□□□ -0.25
ERGIC1-208ENST00000520399 NSFL1CQ9UNZ2 370 aaKnown RBP13.52□□□□□ -0.25
ERGIC1-208ENST00000520399 NCBP1Q09161 790 aaKnown RBP13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 MMS22LQ6ZRQ5 1243 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 LMBR1Q8WVP7 490 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 STMN2Q93045 179 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 XAGE2Q96GT9 111 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 VCX3BQ9H321 246 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 SUFUQ9UMX1 484 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 SNX14Q9Y5W7 946 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 ATP11AP98196 1134 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 VPS52Q8N1B4 723 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 SEC62Q99442 399 aaKnown RBP13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 ZKSCAN3Q9BRR0 538 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 CEP170Q5SW79 1584 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 LMOD1P29536 600 aaPredicted RBP13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 OAS2P29728 719 aaKnown RBP13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 TRAPPC3LQ5T215 181 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 RABGAP1Q9Y3P9 1069 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
ERGIC1-208ENST00000520399 NEK11Q8NG66 645 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 HAUS7Q99871 368 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 IMPG2Q9BZV3 1241 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 GNPATO15228 680 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 CACNA2D3Q8IZS8 1091 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 FAM89AQ96GI7 184 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 MGEA5O60502 916 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 PTGS1P23219 599 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 OTUD7AQ8TE49 926 aaPredicted RBP13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 PTPRTO14522 1441 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 A0A087WUV0 522 aaPredicted RBP13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 DEXIO95424 95 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 AFAP1L2Q8N4X5 818 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 IQUBQ8NA54 791 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 IFT74Q96LB3 600 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 SAP30BPQ9UHR5 308 aaKnown RBP13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
ERGIC1-208ENST00000520399 ZFYVE16Q7Z3T8 1539 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 TTC6Q86TZ1 520 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 SUCLG2Q96I99 432 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 NUF2Q9BZD4 464 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 IFNKQ9P0W0 207 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 USH1CQ9Y6N9 552 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 KRT86O43790 486 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 EEF2P13639 858 aaKnown RBP13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 CPA1P15085 419 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 B4E1Z4 1266 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 GBP1P32455 592 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 STX17P56962 302 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 GEN1Q17RS7 908 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 JAKMIP2Q96AA8 810 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 TBC1D31Q96DN5 1066 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 LGR6Q9HBX8 967 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 SEPT8Q92599 483 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 JAG2Q9Y219 1238 aa13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 NOC2LQ9Y3T9 749 aaKnown RBP13.49□□□□□ -0.25
ERGIC1-208ENST00000520399 B4DLN1 442 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 MRPL12P52815 198 aaKnown RBP13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 ZBTB9Q96C00 473 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 MRFAP1Q9Y605 127 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 RFX1P22670 979 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 HIBADHP31937 336 aaKnown RBP13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 ZNF174Q15697 407 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 E2F4Q16254 413 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 PDCD2Q16342 344 aaPredicted RBP13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 DBNDD2Q9BQY9 259 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 KIAA0232Q92628 1395 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 GJC1P36383 396 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 MAGEA9P43362 315 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 APPBP2Q92624 585 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 CTNND2Q9UQB3 1225 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 LRRD1A4D1F6 860 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 TIMM10P62072 90 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 TSGA10Q9BZW7 698 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 VCX3AQ9NNX9 186 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 SAMD15Q9P1V8 674 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 PLS1Q14651 629 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 SV2BQ7L1I2 683 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 TEX11Q8IYF3 940 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 ARMC2Q8NEN0 867 aa13.48□□□□□ -0.25
ERGIC1-208ENST00000520399 RILPL1Q5EBL4 403 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms