RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 FAM43AQ8N2R8 423 aa17.13■□□□□ 0.33
VEGFA-221ENST00000520265 PTPN18Q99952 460 aa17.13■□□□□ 0.33
VEGFA-221ENST00000520265 MCOLN1Q9GZU1 580 aa17.13■□□□□ 0.33
VEGFA-221ENST00000520265 R3HDMLQ9H3Y0 253 aa17.13■□□□□ 0.33
VEGFA-221ENST00000520265 DOCK1Q14185 1865 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 CDK5RAP2Q96SN8 1893 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 TRIM75PA6NK02 468 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 PHF20L1A8MW92 1017 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 CTNND1O60716 968 aaKnown RBP17.12■□□□□ 0.33
VEGFA-221ENST00000520265 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-221ENST00000520265 SLFNL1Q499Z3 407 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 ZSCAN25Q6NSZ9 544 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 TMED8Q6PL24 325 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-221ENST00000520265 GADL1Q6ZQY3 521 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 ARMT1Q9H993 441 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 ZFYVE28Q9HCC9 887 aa17.12■□□□□ 0.33
VEGFA-221ENST00000520265 HERC5Q9UII4 1024 aaKnown RBP17.12■□□□□ 0.33
VEGFA-221ENST00000520265 TESPA1A2RU30 521 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-221ENST00000520265 CCDC85CA6NKD9 419 aa17.11■□□□□ 0.33
VEGFA-221ENST00000520265 ERC2O15083 957 aa17.11■□□□□ 0.33
VEGFA-221ENST00000520265 ECM2O94769 699 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-221ENST00000520265 MBD4O95243 580 aa17.11■□□□□ 0.33
VEGFA-221ENST00000520265 PTPRAP18433 802 aa17.11■□□□□ 0.33
VEGFA-221ENST00000520265 CTU1Q7Z7A3 348 aaKnown RBP17.11■□□□□ 0.33
VEGFA-221ENST00000520265 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
VEGFA-221ENST00000520265 ABHD8Q96I13 439 aa17.11■□□□□ 0.33
VEGFA-221ENST00000520265 FOCADQ5VW36 1801 aa17.11■□□□□ 0.33
VEGFA-221ENST00000520265 NAV1Q8NEY1 1877 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 BTBD19C9JJ37 291 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 TBC1D12O60347 775 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 GDF11O95390 407 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 ADD2P35612 726 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 OTUD7AQ8TE49 926 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-221ENST00000520265 SDR42E1Q8WUS8 393 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 DDRGK1Q96HY6 314 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 RIOK1Q9BRS2 568 aaKnown RBP17.1■□□□□ 0.33
VEGFA-221ENST00000520265 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-221ENST00000520265 LAMB1P07942 1786 aa17.1■□□□□ 0.33
VEGFA-221ENST00000520265 MYH1P12882 1939 aa17.09■□□□□ 0.33
VEGFA-221ENST00000520265 MX1P20591 662 aa17.09■□□□□ 0.33
VEGFA-221ENST00000520265 AAMPQ13685 434 aa17.09■□□□□ 0.33
VEGFA-221ENST00000520265 TTC6Q86TZ1 520 aa17.09■□□□□ 0.33
VEGFA-221ENST00000520265 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
VEGFA-221ENST00000520265 MYH7P12883 1935 aa17.08■□□□□ 0.33
VEGFA-221ENST00000520265 ATAD5Q96QE3 1844 aa17.08■□□□□ 0.33
VEGFA-221ENST00000520265 TTC41PQ6P2S7 1318 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 PDHXO00330 501 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 CHGBP05060 677 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 CAP2P40123 477 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 HDAC1Q13547 482 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-221ENST00000520265 FOXP4Q8IVH2 680 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-221ENST00000520265 AMOTL1Q8IY63 956 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 CD99L2Q8TCZ2 262 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 FSD1Q9BTV5 496 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 TRIM17Q9Y577 477 aa17.08■□□□□ 0.32
VEGFA-221ENST00000520265 CXCL11O14625 94 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 GLRX3O76003 335 aaKnown RBP17.07■□□□□ 0.32
VEGFA-221ENST00000520265 SP3Q02447 781 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 FASTKD5Q7L8L6 764 aaKnown RBP17.07■□□□□ 0.32
VEGFA-221ENST00000520265 ERO1AQ96HE7 468 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 CFHR5Q9BXR6 569 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 AS3MTQ9HBK9 375 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 SERPINB13Q9UIV8 391 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 KCNH4Q9UQ05 1017 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 SLC4A4Q9Y6R1 1079 aa17.07■□□□□ 0.32
VEGFA-221ENST00000520265 SIPA1L1O43166 1804 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 USP17L5A8MUK1 530 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 PRKAB2O43741 272 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 SPP2Q13103 211 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 RRP1BQ14684 758 aaKnown RBP17.06■□□□□ 0.32
VEGFA-221ENST00000520265 UBE3CQ15386 1083 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 LRRFIP1Q32MZ4 808 aaKnown RBP17.06■□□□□ 0.32
VEGFA-221ENST00000520265 ANKRD23Q86SG2 305 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 KBTBD3Q8NAB2 608 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 DNAJC18Q9H819 358 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 AFG3L2Q9Y4W6 797 aa17.06■□□□□ 0.32
VEGFA-221ENST00000520265 A0A0G2JLL6 359 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-221ENST00000520265 MPHOSPH10O00566 681 aaKnown RBP17.05■□□□□ 0.32
VEGFA-221ENST00000520265 ASNSP08243 561 aa17.05■□□□□ 0.32
VEGFA-221ENST00000520265 KIF22Q14807 665 aa17.05■□□□□ 0.32
VEGFA-221ENST00000520265 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
VEGFA-221ENST00000520265 NOM1Q5C9Z4 860 aaKnown RBP17.05■□□□□ 0.32
VEGFA-221ENST00000520265 PRRT2Q7Z6L0 340 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-221ENST00000520265 ZNF280CQ8ND82 737 aa17.05■□□□□ 0.32
VEGFA-221ENST00000520265 PARK7Q99497 189 aaKnown RBP17.05■□□□□ 0.32
VEGFA-221ENST00000520265 FEZ1Q99689 392 aa17.05■□□□□ 0.32
VEGFA-221ENST00000520265 CPA4Q9UI42 421 aa17.05■□□□□ 0.32
VEGFA-221ENST00000520265 GH2P01242 217 aa17.04■□□□□ 0.32
VEGFA-221ENST00000520265 CYP2D6P10635 497 aa17.04■□□□□ 0.32
VEGFA-221ENST00000520265 PLCD1P51178 756 aa17.04■□□□□ 0.32
VEGFA-221ENST00000520265 HMGCS2P54868 508 aa17.04■□□□□ 0.32
VEGFA-221ENST00000520265 SHROOM1Q2M3G4 852 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-221ENST00000520265 SMCR8Q8TEV9 937 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-221ENST00000520265 PUS7LQ9H0K6 701 aaKnown RBP17.04■□□□□ 0.32
VEGFA-221ENST00000520265 ZCCHC17Q9NP64 241 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms