RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PALD1Q9ULE6 856 aa6.08□□□□□ -1.44
SDC2-204ENST00000519914 PRR12Q9ULL5 1215 aa6.08□□□□□ -1.44
SDC2-204ENST00000519914 NUP188Q5SRE5 1749 aa6.08□□□□□ -1.44
SDC2-204ENST00000519914 TNS3Q68CZ2 1445 aa6.08□□□□□ -1.44
SDC2-204ENST00000519914 NPHP3Q7Z494 1330 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 MEGF6O75095 1541 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 A6NJY4 79 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 GRM8O00222 908 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 HIP1O00291 1037 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 DDX58O95786 925 aaKnown RBP6.07□□□□□ -1.44
SDC2-204ENST00000519914 MBD3O95983 291 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 PHKG2P15735 406 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 EIF2S2P20042 333 aaKnown RBP6.07□□□□□ -1.44
SDC2-204ENST00000519914 ADH6P28332 368 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 NEK4P51957 841 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 CCDC173Q0VFZ6 552 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 WASHC4Q2M389 1173 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 HS1BP3Q53T59 392 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 MPRIPQ6WCQ1 1025 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 CD163Q86VB7 1156 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 FCHSD1Q86WN1 690 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 C1orf216Q8TAB5 229 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 KAZALD1Q96I82 304 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 PANK2Q9BZ23 570 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 IL25Q9H293 177 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 ALDH8A1Q9H2A2 487 aaPredicted RBP6.07□□□□□ -1.44
SDC2-204ENST00000519914 SLC52A2Q9HAB3 445 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 RRAGDQ9NQL2 400 aaPredicted RBP6.07□□□□□ -1.44
SDC2-204ENST00000519914 SPEF2Q9C093 1822 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 ABCA3Q99758 1704 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 SHANK3Q9BYB0 1731 aa6.07□□□□□ -1.44
SDC2-204ENST00000519914 CDK2AP1O14519 115 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 SKIP12755 728 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 CHRNA4P43681 627 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 DGKGP49619 791 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 PKP1Q13835 747 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 PROSER3Q2NL68 480 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 RABL6Q3YEC7 729 aaPredicted RBP6.06□□□□□ -1.44
SDC2-204ENST00000519914 TSHZ3Q63HK5 1081 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 ZNF790Q6PG37 636 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 LARP1Q6PKG0 1096 aaKnown RBP6.06□□□□□ -1.44
SDC2-204ENST00000519914 C14orf37Q86TY3 774 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 CLASRPQ8N2M8 674 aaKnown RBP6.06□□□□□ -1.44
SDC2-204ENST00000519914 RUFY2Q8WXA3 655 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 RILPL2Q969X0 211 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 EVI5LQ96CN4 794 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 GPATCH3Q96I76 525 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 PDLIM2Q96JY6 352 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 METTL22Q9BUU2 404 aaPredicted RBP6.06□□□□□ -1.44
SDC2-204ENST00000519914 GZF1Q9H116 711 aaPredicted RBP6.06□□□□□ -1.44
SDC2-204ENST00000519914 IL1RAPL2Q9NP60 686 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 ANO2Q9NQ90 1003 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 STRN4Q9NRL3 753 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 ECHDC1Q9NTX5 307 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 MAP3K2Q9Y2U5 619 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 SNX14Q9Y5W7 946 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 DDX49Q9Y6V7 483 aaKnown RBP6.06□□□□□ -1.44
SDC2-204ENST00000519914 TJP1Q07157 1748 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 RPAP1Q9BWH6 1393 aaPredicted RBP6.06□□□□□ -1.44
SDC2-204ENST00000519914 MED23Q9ULK4 1368 aa6.06□□□□□ -1.44
SDC2-204ENST00000519914 WDR33Q9C0J8 1336 aaKnown RBP6.06□□□□□ -1.44
SDC2-204ENST00000519914 IGKV5-2P06315 115 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 TXLNAP40222 546 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 ZSCAN23Q3MJ62 389 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 TBCELQ5QJ74 424 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 VPS53Q5VIR6 699 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 MCTP1Q6DN14 999 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 LRSAM1Q6UWE0 723 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 PROSER2Q86WR7 435 aaPredicted RBP6.05□□□□□ -1.44
SDC2-204ENST00000519914 IFNL2Q8IZJ0 200 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.05□□□□□ -1.44
SDC2-204ENST00000519914 GPT2Q8TD30 523 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 SUCLG2Q96I99 432 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 ZSCAN31Q96LW9 406 aaPredicted RBP6.05□□□□□ -1.44
SDC2-204ENST00000519914 SLC4A9Q96Q91 983 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 COPRSQ9NQ92 184 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 NOP53Q9NZM5 478 aaKnown RBP6.05□□□□□ -1.44
SDC2-204ENST00000519914 IQSEC3Q9UPP2 1182 aaPredicted RBP6.05□□□□□ -1.44
SDC2-204ENST00000519914 SPG7Q9UQ90 795 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 PCDHGA11Q9Y5H2 935 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 SPATA31A3Q5VYP0 1347 aa6.05□□□□□ -1.44
SDC2-204ENST00000519914 TNS2Q63HR2 1409 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 SASH1O94885 1247 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 RFX5P48382 616 aaPredicted RBP6.04□□□□□ -1.44
SDC2-204ENST00000519914 DOC2BQ14184 412 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 HSP90AA2PQ14568 343 aaPredicted RBP6.04□□□□□ -1.44
SDC2-204ENST00000519914 NECTIN1Q15223 517 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 EML3Q32P44 896 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 ZNF295-AS1Q8N0V1 137 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 RAPGEF4Q8WZA2 1011 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 MAP4K1Q92918 833 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 PLVAPQ9BX97 442 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 SH2B1Q9NRF2 756 aaPredicted RBP6.04□□□□□ -1.44
SDC2-204ENST00000519914 C9orf78Q9NZ63 289 aaPredicted RBP6.04□□□□□ -1.44
SDC2-204ENST00000519914 MARK1Q9P0L2 795 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 LIMCH1Q9UPQ0 1083 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 KCPQ6ZWJ8 1503 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 CCDC171Q6TFL3 1326 aa6.04□□□□□ -1.44
SDC2-204ENST00000519914 ANXA1P04083 346 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 SNRPA1P09661 255 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms