RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 PI16Q6UXB8 463 aa7.78□□□□□ -1.16
PCM1-213ENST00000519802 TOP6BLQ8N6T0 577 aa7.78□□□□□ -1.16
PCM1-213ENST00000519802 ISL2Q96A47 359 aa7.78□□□□□ -1.16
PCM1-213ENST00000519802 KRTAP4-2Q9BYR5 136 aa7.78□□□□□ -1.16
PCM1-213ENST00000519802 PARP2Q9UGN5 583 aa7.78□□□□□ -1.16
PCM1-213ENST00000519802 SNX11Q9Y5W9 270 aa7.78□□□□□ -1.16
PCM1-213ENST00000519802 ITIH2P19823 946 aa7.77□□□□□ -1.17
PCM1-213ENST00000519802 RANGAP1P46060 587 aaPredicted RBP7.77□□□□□ -1.17
PCM1-213ENST00000519802 FGD1P98174 961 aa7.77□□□□□ -1.17
PCM1-213ENST00000519802 EPS8L3Q8TE67 593 aaKnown RBP7.77□□□□□ -1.17
PCM1-213ENST00000519802 KCNB2Q92953 911 aa7.77□□□□□ -1.17
PCM1-213ENST00000519802 FAM84AQ96KN4 292 aa7.77□□□□□ -1.17
PCM1-213ENST00000519802 HEXIM2Q96MH2 286 aaKnown RBP7.77□□□□□ -1.17
PCM1-213ENST00000519802 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
PCM1-213ENST00000519802 TMEM39AQ9NV64 488 aa7.77□□□□□ -1.17
PCM1-213ENST00000519802 NLRP2Q9NX02 1062 aa7.77□□□□□ -1.17
PCM1-213ENST00000519802 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.77□□□□□ -1.17
PCM1-213ENST00000519802 E9PSI1 815 aa7.76□□□□□ -1.17
PCM1-213ENST00000519802 PPP2R3AQ06190 1150 aa7.76□□□□□ -1.17
PCM1-213ENST00000519802 PSMD2Q13200 908 aa7.76□□□□□ -1.17
PCM1-213ENST00000519802 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.76□□□□□ -1.17
PCM1-213ENST00000519802 ZC3H12AQ5D1E8 599 aaKnown RBP7.76□□□□□ -1.17
PCM1-213ENST00000519802 DTHD1Q6ZMT9 781 aa7.76□□□□□ -1.17
PCM1-213ENST00000519802 FAM214BQ7L5A3 538 aa7.76□□□□□ -1.17
PCM1-213ENST00000519802 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.76□□□□□ -1.17
PCM1-213ENST00000519802 BHLHE22Q8NFJ8 381 aaPredicted RBP7.76□□□□□ -1.17
PCM1-213ENST00000519802 SSU72Q9NP77 194 aaKnown RBP7.76□□□□□ -1.17
PCM1-213ENST00000519802 GPN3Q9UHW5 284 aaPredicted RBP7.76□□□□□ -1.17
PCM1-213ENST00000519802 LRRC10BA6NIK2 292 aa7.75□□□□□ -1.17
PCM1-213ENST00000519802 ZSWIM9Q86XI8 627 aa7.75□□□□□ -1.17
PCM1-213ENST00000519802 RNF214Q8ND24 703 aa7.75□□□□□ -1.17
PCM1-213ENST00000519802 STK35Q8TDR2 534 aa7.75□□□□□ -1.17
PCM1-213ENST00000519802 FBF1Q8TES7 1133 aa7.75□□□□□ -1.17
PCM1-213ENST00000519802 PRDM7Q9NQW5 492 aa7.75□□□□□ -1.17
PCM1-213ENST00000519802 VTI1BQ9UEU0 232 aa7.75□□□□□ -1.17
PCM1-213ENST00000519802 ZNF503-AS2A6NEH8 195 aa7.74□□□□□ -1.17
PCM1-213ENST00000519802 FCGRTP55899 365 aa7.74□□□□□ -1.17
PCM1-213ENST00000519802 ERVK-24P63145 666 aa7.74□□□□□ -1.17
PCM1-213ENST00000519802 CILP2Q8IUL8 1156 aa7.74□□□□□ -1.17
PCM1-213ENST00000519802 SULF2Q8IWU5 870 aa7.74□□□□□ -1.17
PCM1-213ENST00000519802 FAM53CQ9NYF3 392 aa7.74□□□□□ -1.17
PCM1-213ENST00000519802 SPG7Q9UQ90 795 aa7.74□□□□□ -1.17
PCM1-213ENST00000519802 ARNTP27540 789 aa7.73□□□□□ -1.17
PCM1-213ENST00000519802 GNA15P30679 374 aa7.73□□□□□ -1.17
PCM1-213ENST00000519802 KCNMB1Q16558 191 aa7.73□□□□□ -1.17
PCM1-213ENST00000519802 KRTAP19-4Q3LI73 84 aa7.73□□□□□ -1.17
PCM1-213ENST00000519802 SPACA3Q8IXA5 215 aa7.73□□□□□ -1.17
PCM1-213ENST00000519802 ASB11Q8WXH4 323 aa7.73□□□□□ -1.17
PCM1-213ENST00000519802 KIAA1522Q9P206 1035 aaPredicted RBP7.73□□□□□ -1.17
PCM1-213ENST00000519802 IGF2BP3O00425 579 aaKnown RBP eCLIP7.72□□□□□ -1.17
PCM1-213ENST00000519802 SORBS3O60504 671 aa7.72□□□□□ -1.17
PCM1-213ENST00000519802 ZP2Q05996 745 aa7.72□□□□□ -1.17
PCM1-213ENST00000519802 IKZF1Q13422 519 aa7.72□□□□□ -1.17
PCM1-213ENST00000519802 TSNAXIP1Q2TAA8 658 aa7.72□□□□□ -1.17
PCM1-213ENST00000519802 GTF2IRD1Q9UHL9 959 aa7.72□□□□□ -1.17
PCM1-213ENST00000519802 CTNND2Q9UQB3 1225 aa7.72□□□□□ -1.17
PCM1-213ENST00000519802 XRCC5P13010 732 aaKnown RBP7.71□□□□□ -1.18
PCM1-213ENST00000519802 DAB2P98082 770 aa7.71□□□□□ -1.18
PCM1-213ENST00000519802 MLANAQ16655 118 aa7.71□□□□□ -1.18
PCM1-213ENST00000519802 MAP1SQ66K74 1059 aaPredicted RBP7.71□□□□□ -1.18
PCM1-213ENST00000519802 TMC4Q7Z404 712 aa7.71□□□□□ -1.18
PCM1-213ENST00000519802 PRDM10Q9NQV6 1147 aa7.71□□□□□ -1.18
PCM1-213ENST00000519802 KRTAP9-7A8MTY7 169 aa7.7□□□□□ -1.18
PCM1-213ENST00000519802 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.7□□□□□ -1.18
PCM1-213ENST00000519802 NME2P22392 152 aa7.7□□□□□ -1.18
PCM1-213ENST00000519802 EIF4BP23588 611 aaKnown RBP7.7□□□□□ -1.18
PCM1-213ENST00000519802 ZNF252P-AS1Q0IIN9 211 aa7.7□□□□□ -1.18
PCM1-213ENST00000519802 NKPD1Q17RQ9 610 aa7.7□□□□□ -1.18
PCM1-213ENST00000519802 NXPE4Q6UWF7 544 aa7.7□□□□□ -1.18
PCM1-213ENST00000519802 GPBAR1Q8TDU6 330 aa7.7□□□□□ -1.18
PCM1-213ENST00000519802 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
PCM1-213ENST00000519802 CACNA2D2Q9NY47 1150 aa7.7□□□□□ -1.18
PCM1-213ENST00000519802 NTF4P34130 210 aa7.69□□□□□ -1.18
PCM1-213ENST00000519802 LIN37Q96GY3 246 aaPredicted RBP7.69□□□□□ -1.18
PCM1-213ENST00000519802 EMILIN2Q9BXX0 1053 aa7.69□□□□□ -1.18
PCM1-213ENST00000519802 BCO2Q9BYV7 579 aa7.69□□□□□ -1.18
PCM1-213ENST00000519802 C12orf49Q9H741 205 aa7.69□□□□□ -1.18
PCM1-213ENST00000519802 ITGAEP38570 1179 aa7.68□□□□□ -1.18
PCM1-213ENST00000519802 RAP1GAPP47736 663 aa7.68□□□□□ -1.18
PCM1-213ENST00000519802 PPM1JQ5JR12 505 aa7.68□□□□□ -1.18
PCM1-213ENST00000519802 FYB2Q5VWT5 728 aa7.68□□□□□ -1.18
PCM1-213ENST00000519802 TOX2Q96NM4 488 aa7.68□□□□□ -1.18
PCM1-213ENST00000519802 OSBPL7Q9BZF2 842 aa7.68□□□□□ -1.18
PCM1-213ENST00000519802 PITPNM2Q9BZ72 1349 aa7.68□□□□□ -1.18
PCM1-213ENST00000519802 TSPAN15O95858 294 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 CFPP27918 469 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 AFMP43652 599 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 CLCN7P51798 805 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 MRPL58Q14197 206 aaKnown RBP7.67□□□□□ -1.18
PCM1-213ENST00000519802 MPRIPQ6WCQ1 1025 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 UBE3DQ7Z6J8 389 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 ACSBG1Q96GR2 724 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 FRMD6Q96NE9 622 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 AKAP2Q9Y2D5 859 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 AK5Q9Y6K8 562 aa7.67□□□□□ -1.18
PCM1-213ENST00000519802 RECKO95980 971 aa7.66□□□□□ -1.18
PCM1-213ENST00000519802 USP17L7P0C7H9 530 aa7.66□□□□□ -1.18
PCM1-213ENST00000519802 C1QL4Q86Z23 238 aa7.66□□□□□ -1.18
PCM1-213ENST00000519802 TMEM87AQ8NBN3 555 aa7.66□□□□□ -1.18
PCM1-213ENST00000519802 PPP1R16BQ96T49 567 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms