RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 IL17RAQ96F46 866 aa20.76■□□□□ 0.91
IGHV3-52-201ENST00000519770 CSRNP1Q96S65 589 aa20.76■□□□□ 0.91
IGHV3-52-201ENST00000519770 GGA3Q9NZ52 723 aa20.76■□□□□ 0.91
IGHV3-52-201ENST00000519770 PITPNM2Q9BZ72 1349 aa20.76■□□□□ 0.91
IGHV3-52-201ENST00000519770 COL2A1P02458 1487 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 CDK5RAP2Q96SN8 1893 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 GOLGB1Q14789 3259 aaKnown RBP20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 MCM5P33992 734 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 PLCD1P51178 756 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 RASA3Q14644 834 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 RUFY3Q7L099 469 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 SULF1Q8IWU6 871 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 EHD4Q9H223 541 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 TAF1DQ9H5J8 278 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 ZSWIM6Q9HCJ5 1215 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 RBM19Q9Y4C8 960 aaKnown RBP20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 PPP2R3BQ9Y5P8 575 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 SCN4AP35499 1836 aa20.75■□□□□ 0.91
IGHV3-52-201ENST00000519770 ATRNL1Q5VV63 1379 aa20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 LAMA4Q16363 1823 aa20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 RANBP6O60518 1105 aaKnown RBP20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 SART3Q15020 963 aaKnown RBP20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 ADCK5Q3MIX3 580 aa20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 C16orf86Q6ZW13 317 aa20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 DHX32Q7L7V1 743 aaKnown RBP20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 ZFPM1Q8IX07 1006 aa20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 DEFB129Q9H1M3 183 aa20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 PDRG1Q9NUG6 133 aa20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 CLEC11AQ9Y240 323 aa20.74■□□□□ 0.91
IGHV3-52-201ENST00000519770 ROBO3Q96MS0 1386 aa20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 LAMB1P07942 1786 aa20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 ERICH2A1L162 156 aa20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 B4E1Z4 1266 aa20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 ORC4O43929 436 aa20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 HIRAP54198 1017 aaPredicted RBP20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 DYNLL2Q96FJ2 89 aa20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 KIF2CQ99661 725 aa20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 UPF3BQ9BZI7 483 aaKnown RBP20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 HERC5Q9UII4 1024 aaKnown RBP20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 WDR90Q96KV7 1748 aa20.73■□□□□ 0.91
IGHV3-52-201ENST00000519770 DDTLA6NHG4 134 aaPredicted RBP20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 CDK8P49336 464 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 BECN1Q14457 450 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 ANKRD1Q15327 319 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 STOX1Q6ZVD7 989 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 IQCA1Q86XH1 822 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 UBAC1Q9BSL1 405 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 TMEM39BQ9GZU3 492 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 NBPF3Q9H094 633 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 RRAGCQ9HB90 399 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 TAF6LQ9Y6J9 622 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 ASTN2O75129 1339 aaPredicted RBP20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 CNTNAP1P78357 1384 aa20.72■□□□□ 0.91
IGHV3-52-201ENST00000519770 TSPY2A6NKD2 308 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 KDM4AO75164 1064 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 PRDM1O75626 825 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 MCM2P49736 904 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 SUPT20HL1Q3ZLR7 823 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 CCDC178Q5BJE1 867 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 DCAF15Q66K64 600 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 DAXXQ9UER7 740 aaPredicted RBP20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 NEDD4P46934 1319 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 WDR19Q8NEZ3 1342 aa20.71■□□□□ 0.91
IGHV3-52-201ENST00000519770 PRC1O43663 620 aa20.7■□□□□ 0.9
IGHV3-52-201ENST00000519770 FGRP09769 529 aa20.7■□□□□ 0.9
IGHV3-52-201ENST00000519770 TSPY3P0CV98 308 aa20.7■□□□□ 0.9
IGHV3-52-201ENST00000519770 TSPY8P0CW00 308 aa20.7■□□□□ 0.9
IGHV3-52-201ENST00000519770 HSCBQ8IWL3 235 aa20.7■□□□□ 0.9
IGHV3-52-201ENST00000519770 ZNF526Q8TF50 670 aaPredicted RBP20.7■□□□□ 0.9
IGHV3-52-201ENST00000519770 SH3BP5LQ7L8J4 393 aa20.69■□□□□ 0.9
IGHV3-52-201ENST00000519770 KRT26Q7Z3Y9 468 aa20.69■□□□□ 0.9
IGHV3-52-201ENST00000519770 MB21D2Q8IYB1 491 aaPredicted RBP20.69■□□□□ 0.9
IGHV3-52-201ENST00000519770 TMEM87BQ96K49 555 aa20.69■□□□□ 0.9
IGHV3-52-201ENST00000519770 CCDC17Q96LX7 622 aa20.69■□□□□ 0.9
IGHV3-52-201ENST00000519770 INCENPQ9NQS7 918 aa20.69■□□□□ 0.9
IGHV3-52-201ENST00000519770 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.69■□□□□ 0.9
IGHV3-52-201ENST00000519770 DDX60LQ5H9U9 1706 aaKnown RBP20.69■□□□□ 0.9
IGHV3-52-201ENST00000519770 IFIT3O14879 490 aaKnown RBP20.68■□□□□ 0.9
IGHV3-52-201ENST00000519770 TBC1D12O60347 775 aa20.68■□□□□ 0.9
IGHV3-52-201ENST00000519770 NF2P35240 595 aa20.68■□□□□ 0.9
IGHV3-52-201ENST00000519770 TFAP4Q01664 338 aa20.68■□□□□ 0.9
IGHV3-52-201ENST00000519770 GABPAQ06546 454 aa20.68■□□□□ 0.9
IGHV3-52-201ENST00000519770 PPP4R3BQ5MIZ7 849 aa20.68■□□□□ 0.9
IGHV3-52-201ENST00000519770 MTA3Q9BTC8 594 aa20.68■□□□□ 0.9
IGHV3-52-201ENST00000519770 ZSWIM5Q9P217 1185 aa20.68■□□□□ 0.9
IGHV3-52-201ENST00000519770 SRCAPQ6ZRS2 3230 aa20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 MPHOSPH10O00566 681 aaKnown RBP20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 CPA1P15085 419 aa20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 CERKLQ49MI3 558 aaPredicted RBP20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 Q6ZUG5 572 aa20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 CDC37L1Q7L3B6 337 aa20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 SLC44A5Q8NCS7 719 aa20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 PGAP2Q9UHJ9 254 aa20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 SCAF8Q9UPN6 1271 aaKnown RBP20.67■□□□□ 0.9
IGHV3-52-201ENST00000519770 POTECB2RU33 542 aa20.66■□□□□ 0.9
IGHV3-52-201ENST00000519770 SMIM22K7EJ46 135 aa20.66■□□□□ 0.9
IGHV3-52-201ENST00000519770 RASA1P20936 1047 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms