RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	RNF20	Q5VTR2	975 aa		12.86	□□□□□ -0.35
CHTF8-206	ENST00000519534	USP26	Q9BXU7	913 aa		12.86	□□□□□ -0.35
CHTF8-206	ENST00000519534	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.86	□□□□□ -0.35
CHTF8-206	ENST00000519534	RNF41	Q9H4P4	317 aa	Predicted RBP	12.86	□□□□□ -0.35
CHTF8-206	ENST00000519534	ANO2	Q9NQ90	1003 aa		12.86	□□□□□ -0.35
CHTF8-206	ENST00000519534	ZNF112	Q9UJU3	913 aa		12.86	□□□□□ -0.35
CHTF8-206	ENST00000519534	MYH2	Q9UKX2	1941 aa		12.86	□□□□□ -0.35
CHTF8-206	ENST00000519534	PASK	Q96RG2	1323 aa		12.86	□□□□□ -0.35
CHTF8-206	ENST00000519534	ADAMTSL1	Q8N6G6	1762 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	PTH1R	Q03431	593 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	PDE4B	Q07343	736 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	PPARA	Q07869	468 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	TATDN1	Q6P1N9	297 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	C16orf86	Q6ZW13	317 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	IL27	Q8NEV9	243 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	KCNB2	Q92953	911 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	CDCA5	Q96FF9	252 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	CCDC17	Q96LX7	622 aa		12.85	□□□□□ -0.35
CHTF8-206	ENST00000519534	ROBO3	Q96MS0	1386 aa		12.84	□□□□□ -0.35
CHTF8-206	ENST00000519534	ADM5	C9JUS6	153 aa		12.84	□□□□□ -0.35
CHTF8-206	ENST00000519534	KLRG1	Q96E93	195 aa		12.84	□□□□□ -0.35
CHTF8-206	ENST00000519534	ZNF341	Q9BYN7	854 aa		12.84	□□□□□ -0.35
CHTF8-206	ENST00000519534	RBM8A	Q9Y5S9	174 aa	Known RBP	12.84	□□□□□ -0.35
CHTF8-206	ENST00000519534	PHF20L1	A8MW92	1017 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	MINDY4B	A8MYZ0	360 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	ORC4	O43929	436 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	CTNND1	O60716	968 aa	Known RBP	12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	USP2	O75604	605 aa	Predicted RBP	12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	ZKSCAN1	P17029	563 aa	Predicted RBP	12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	KCNA4	P22459	653 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	HSPA4	P34932	840 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	IREB2	P48200	963 aa	Known RBP	12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	ARMC9	Q7Z3E5	817 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	C2orf69	Q8N8R5	385 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	STAG1	Q8WVM7	1258 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	IL17RA	Q96F46	866 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	TRIM34	Q9BYJ4	488 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	BACH2	Q9BYV9	841 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	CNNM2	Q9H8M5	875 aa		12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	SAP30BP	Q9UHR5	308 aa	Known RBP	12.83	□□□□□ -0.36
CHTF8-206	ENST00000519534	CYP21A2	P08686	494 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	MCC	P23508	829 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	CDK8	P49336	464 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	ANAPC15	P60006	121 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	MAP3K9	P80192	1104 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	KRT32	Q14532	448 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	PPP4R3B	Q5MIZ7	849 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	AKNAD1	Q5T1N1	836 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	LDLRAD1	Q5T700	205 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	MFSD6	Q6ZSS7	791 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	HHIPL1	Q96JK4	782 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	MTA3	Q9BTC8	594 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	TBC1D2	Q9BYX2	928 aa		12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
CHTF8-206	ENST00000519534	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	NOL9	Q5SY16	702 aa	Known RBP	12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	PRAMEF18	Q5VWM3	479 aa		12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	CST9	Q5W186	159 aa		12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	CREB3L3	Q68CJ9	461 aa		12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	MIGA2	Q7L4E1	593 aa		12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	ANKRD13A	Q8IZ07	590 aa		12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.81	□□□□□ -0.36	8e-6	■■□□□ 11.7
CHTF8-206	ENST00000519534	KRT23	Q9C075	422 aa		12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	UPF2	Q9HAU5	1272 aa	Known RBP	12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	MKNK2	Q9HBH9	465 aa		12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	GBA2	Q9HCG7	927 aa	Predicted RBP	12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
CHTF8-206	ENST00000519534	MYH7	P12883	1935 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	TRAF5	O00463	557 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	SLC27A2	O14975	620 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	CELF2	O95319	508 aa	Known RBP	12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	ASNS	P08243	561 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	HMGB1	P09429	215 aa	Known RBP	12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	CYP2D6	P10635	497 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	SHMT1	P34896	483 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	CAP2	P40123	477 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	TRDN	Q13061	729 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	CERKL	Q49MI3	558 aa	Predicted RBP	12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	CCDC178	Q5BJE1	867 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	CDAN1	Q8IWY9	1227 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	DNAJC18	Q9H819	358 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	TCP11L1	Q9NUJ3	509 aa		12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	SCAF8	Q9UPN6	1271 aa	Known RBP	12.8	□□□□□ -0.36
CHTF8-206	ENST00000519534	CYP2D7	A0A087X1C5	515 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	TMEM88B	A6NKF7	163 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	ABCB7	O75027	752 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	PSMA5	P28066	241 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	APLP1	P51693	650 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	ESR2	Q92731	530 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	DYNLL2	Q96FJ2	89 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	TTC14	Q96N46	770 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	TM6SF1	Q9BZW5	370 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	CABP5	Q9NP86	173 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534	SYNPO2	Q9UMS6	1093 aa		12.79	□□□□□ -0.36
CHTF8-206	ENST00000519534		E7EWF7	191 aa		12.78	□□□□□ -0.36
CHTF8-206	ENST00000519534	SEC24B	O95487	1268 aa		12.78	□□□□□ -0.36
CHTF8-206	ENST00000519534	RASA1	P20936	1047 aa		12.78	□□□□□ -0.36

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