RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 MYH6P13533 1939 aa19.01■□□□□ 0.63
PCDHGA11-202ENST00000518882 ITGB4P16144 1822 aa19.01■□□□□ 0.63
PCDHGA11-202ENST00000518882 PATL2C9JE40 543 aaKnown RBP19■□□□□ 0.63
PCDHGA11-202ENST00000518882 POLR2DO15514 142 aaKnown RBP19■□□□□ 0.63
PCDHGA11-202ENST00000518882 MYO1BO43795 1136 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 MBD4O95243 580 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 IFNAR1P17181 557 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 POSTNQ15063 836 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 DIS3L2Q8IYB7 885 aaKnown RBP19■□□□□ 0.63
PCDHGA11-202ENST00000518882 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
PCDHGA11-202ENST00000518882 CMTR1Q8N1G2 835 aaKnown RBP19■□□□□ 0.63
PCDHGA11-202ENST00000518882 MED15Q96RN5 788 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 ZKSCAN3Q9BRR0 538 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 NAPBQ9H115 298 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 ARMT1Q9H993 441 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 SNAP23O00161 211 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 ARHGAP6O43182 974 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 TADA3O75528 432 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 ZNF18P17022 549 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 BMS1Q14692 1282 aaKnown RBP19■□□□□ 0.63
PCDHGA11-202ENST00000518882 FCHSD1Q86WN1 690 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 CCDC82Q8N4S0 544 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 MAGEB6Q8N7X4 407 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 CARD6Q9BX69 1037 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 SERTAD1Q9UHV2 236 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 KAT6BQ8WYB5 2073 aa19■□□□□ 0.63
PCDHGA11-202ENST00000518882 PNMA6AP0CW24 399 aaPredicted RBP18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 PTPREP23469 700 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 TC2NQ8N9U0 490 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 UBXN4Q92575 508 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 SEC31BQ9NQW1 1179 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 NFE2L3Q9Y4A8 694 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 PCDHB6Q9Y5E3 794 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 PRKAB2O43741 272 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 FGFR2P21802 821 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 SARSP49591 514 aaKnown RBP18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 NR5A1Q13285 461 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 TOGARAM2Q6ZUX3 1019 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 BRINP3Q76B58 766 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 ELOA2Q8IYF1 753 aaPredicted RBP18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 PDILTQ8N807 584 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 WDR24Q96S15 920 aa18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 BAG1Q99933 345 aaPredicted RBP18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 TRMT112Q9UI30 125 aaKnown RBP18.99■□□□□ 0.63
PCDHGA11-202ENST00000518882 NID2Q14112 1375 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 GSG1L2A8MUP6 293 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 ZSCAN12O43309 604 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 ZRANB2O95218 330 aaKnown RBP eCLIP18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 STARD3NLO95772 234 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 UQCRFS1P1P0C7P4 283 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 AKNAD1Q5T1N1 836 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 NT5DC1Q5TFE4 455 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 SPATA5Q8NB90 893 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 PLA2G4AP47712 749 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 RASGRF1Q13972 1273 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 MORC3Q14149 939 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 RRP12Q5JTH9 1297 aaKnown RBP18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 USP49Q70CQ1 688 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 MNS1Q8NEH6 495 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 TEX13AQ9BXU3 409 aaPredicted RBP18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 EPC1Q9H2F5 836 aa18.98■□□□□ 0.63
PCDHGA11-202ENST00000518882 LRP5O75197 1615 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 BCORQ6W2J9 1755 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 PUM3Q15397 648 aaKnown RBP18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 OXER1Q8TDS5 423 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 LPIN2Q92539 896 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 ABCA3Q99758 1704 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 RTN1Q16799 776 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 SPECC1LQ69YQ0 1117 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 MFSD6Q6ZSS7 791 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 ENOX1Q8TC92 643 aaKnown RBP18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 WASF1Q92558 559 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 SLC4A9Q96Q91 983 aa18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 SRRTQ9BXP5 876 aaKnown RBP18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 SAMSN1Q9NSI8 373 aaKnown RBP18.97■□□□□ 0.63
PCDHGA11-202ENST00000518882 EFCAB8A8MWE9 144 aa18.96■□□□□ 0.63
PCDHGA11-202ENST00000518882 ACTN4O43707 911 aaKnown RBP18.96■□□□□ 0.63
PCDHGA11-202ENST00000518882 PDE8AO60658 829 aa18.96■□□□□ 0.63
PCDHGA11-202ENST00000518882 SAFBQ15424 915 aaKnown RBP eCLIP18.96■□□□□ 0.63
PCDHGA11-202ENST00000518882 SMARCE1Q969G3 411 aa18.96■□□□□ 0.63
PCDHGA11-202ENST00000518882 FOXP1Q9H334 677 aaPredicted RBP18.96■□□□□ 0.63
PCDHGA11-202ENST00000518882 CNNM2Q9H8M5 875 aa18.96■□□□□ 0.63
PCDHGA11-202ENST00000518882 HOOK1Q9UJC3 728 aaKnown RBP18.96■□□□□ 0.63
PCDHGA11-202ENST00000518882 STX10O60499 249 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 SEC31AO94979 1220 aaKnown RBP18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 CDK11BP21127 795 aaKnown RBP18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 RILPL1Q5EBL4 403 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 LCORLQ8N3X6 602 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 MLKLQ8NB16 471 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 TOMM22Q9NS69 142 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 ZBTB1Q9Y2K1 713 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 SLIT2O94813 1529 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 ATP2B1P20020 1258 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 GNG11P61952 73 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 TRIM22Q8IYM9 498 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 CRACR2BQ8N4Y2 399 aaPredicted RBP18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 SHISA4Q96DD7 197 aa18.95■□□□□ 0.62
PCDHGA11-202ENST00000518882 MPHOSPH8Q99549 860 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms