RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-204	ENST00000517824	SASS6	Q6UVJ0	657 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	SGMS1	Q86VZ5	419 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	CERS3	Q8IU89	383 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	CCDC144CP	Q8IYA2	1237 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	STK11IP	Q8N1F8	1099 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	RGS22	Q8NE09	1264 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	SDR42E1	Q8WUS8	393 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	LY9	Q9HBG7	655 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	C10orf71	Q711Q0	1435 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	COL11A2	P13942	1736 aa	Predicted RBP	12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	NRXN2	Q9P2S2	1712 aa		12.51	□□□□□ -0.41
SPIDR-204	ENST00000517824	CTAGE5	O15320	804 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	BAG3	O95817	575 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	GYS1	P13807	737 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	XBP1	P17861	261 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	ATP2B4	P23634	1241 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	MSN	P26038	577 aa	Known RBP	12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	USP5	P45974	858 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	RCAN1	P53805	252 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	TGFB2	P61812	414 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	MECOM	Q03112	1051 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	PDE4B	Q07343	736 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	TMC4	Q7Z404	712 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	CATIP	Q7Z7H3	387 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	NLGN1	Q8N2Q7	840 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	JMY	Q8N9B5	988 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	KCNG4	Q8TDN1	519 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	NUP133	Q8WUM0	1156 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	PPP1R9B	Q96SB3	815 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	SLC26A6	Q9BXS9	759 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	CLSTN2	Q9H4D0	955 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	CCDC39	Q9UFE4	941 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	GGA1	Q9UJY5	639 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	HPS5	Q9UPZ3	1129 aa		12.5	□□□□□ -0.41
SPIDR-204	ENST00000517824	LTBP1	Q14766	1721 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	NID2	Q14112	1375 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	RANBP6	O60518	1105 aa	Known RBP	12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	PPFIA3	O75145	1194 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	CALM1	P0DP23	149 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	CALM2	P0DP24	149 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	CALM3	P0DP25	149 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	RXRA	P19793	462 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	KLRK1	P26718	216 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	DYNLL1	P63167	89 aa	Known RBP	12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	SLF2	Q8IX21	1173 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	FBXO18	Q8NFZ0	1043 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	ATP8A2	Q9NTI2	1148 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	ANAPC4	Q9UJX5	808 aa		12.49	□□□□□ -0.41
SPIDR-204	ENST00000517824	DDX60L	Q5H9U9	1706 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	TNKS	O95271	1327 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	YEATS4	O95619	227 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	DPEP1	P16444	411 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	KCNA3	P22001	575 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	NT5C2	P49902	561 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	PPP2R5B	Q15173	497 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	IFIT1B	Q5T764	474 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	CCAR1	Q8IX12	1150 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	ZNF654	Q8IZM8	581 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	FSIP1	Q8NA03	581 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	IGDCC4	Q8TDY8	1250 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	NSUN4	Q96CB9	384 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	ZKSCAN3	Q9BRR0	538 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	RIOK1	Q9BRS2	568 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	RBM28	Q9NW13	759 aa	Known RBP	12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	DACT1	Q9NYF0	836 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	ZSWIM5	Q9P217	1185 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	BCS1L	Q9Y276	419 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824	KIF13B	Q9NQT8	1826 aa		12.48	□□□□□ -0.41
SPIDR-204	ENST00000517824		G3V3G9	751 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	FMNL1	O95466	1100 aa	Predicted RBP	12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	PLCG2	P16885	1265 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	LIG1	P18858	919 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	DCAF8	Q5TAQ9	597 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	ADGRA1	Q86SQ6	560 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	MRPS27	Q92552	414 aa	Known RBP	12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	USP28	Q96RU2	1077 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	MYL10	Q9BUA6	226 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	ZNF287	Q9HBT7	754 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	BRMS1	Q9HCU9	246 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	RTEL1	Q9NZ71	1219 aa		12.47	□□□□□ -0.41
SPIDR-204	ENST00000517824	C6orf229	H3BNL8	230 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	PPEF1	O14829	653 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	BBOX1	O75936	387 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	DDAH1	O94760	285 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	DEXI	O95424	95 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	CAVIN2	O95810	425 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	FDPS	P14324	419 aa	Known RBP	12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	PRDX5	P30044	214 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	PLCB2	Q00722	1185 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	KIF23	Q02241	960 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	FAM160A1	Q05DH4	1040 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	CAMK4	Q16566	473 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	CCDC178	Q5BJE1	867 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	MYSM1	Q5VVJ2	828 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	KRT40	Q6A162	431 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	CTCFL	Q8NI51	663 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	TBC1D22A	Q8WUA7	517 aa		12.46	□□□□□ -0.41
SPIDR-204	ENST00000517824	PHKB	Q93100	1093 aa		12.46	□□□□□ -0.41

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