RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ACAD11Q709F0 780 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 NUDT16Q96DE0 195 aaKnown RBP5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 SPACA7Q96KW9 195 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 UTP14AQ9BVJ6 771 aaKnown RBP5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 PANK3Q9H999 370 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 CGNL1Q0VF96 1302 aa5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 BAZ1AQ9NRL2 1556 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 BRD4O60885 1362 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P19-201ENST00000517578 MYOM3Q5VTT5 1437 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 CCDC189A1A4V9 331 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 ANKRD18BA2A2Z9 1011 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 FSCN2O14926 492 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 ADAM11O75078 769 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 MBD3O95983 291 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 CDC25BP30305 580 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 EIF1AXP47813 144 aaKnown RBP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 SERPINB4P48594 390 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 FKBP4Q02790 459 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 BIRC2Q13490 618 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 PDCD2Q16342 344 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 CCDC27Q2M243 656 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 TTC39BQ5VTQ0 682 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 CCDC30Q5VVM6 783 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 AP1ARQ63HQ0 302 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 TTLL5Q6EMB2 1281 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 LRSAM1Q6UWE0 723 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 MMS22LQ6ZRQ5 1243 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 EXOC8Q8IYI6 725 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 TMTC2Q8N394 836 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 IQUBQ8NA54 791 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 TTC16Q8NEE8 873 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 GOLGA5Q8TBA6 731 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 PNISRQ8TF01 805 aaKnown RBP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 FOXD4L4Q8WXT5 416 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 PBX4Q9BYU1 374 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 ABI2Q9NYB9 513 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 FAM53CQ9NYF3 392 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 PSD3Q9NYI0 1048 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 TMEM63CQ9P1W3 806 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 STOML1Q9UBI4 398 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 FNDC3AQ9Y2H6 1198 aaKnown RBP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 CCDC7Q96M83 1385 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 PLEKHH1Q9ULM0 1364 aa5.66□□□□□ -1.5
HMGB1P19-201ENST00000517578 NCOA1Q15788 1441 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 GSC2O15499 205 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 DHX15O43143 795 aaKnown RBP5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 SGSM2O43147 1006 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 BAG4O95429 457 aaKnown RBP5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 CDC37Q16543 378 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZSCAN26Q16670 478 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZDHHC13Q8IUH4 622 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZNF513Q8N8E2 541 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 KLHL23Q8NBE8 558 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 GIMAP7Q8NHV1 300 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 PMFBP1Q8TBY8 1022 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 CHMP4CQ96CF2 233 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 KIF1BPQ96EK5 621 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 FAM46AQ96IP4 442 aaKnown RBP5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 CRBNQ96SW2 442 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 SH3GL3Q99963 347 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 CEP41Q9BYV8 373 aa5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 CWC22Q9HCG8 908 aaKnown RBP5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 SH2B1Q9NRF2 756 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 ARGLU1Q9NWB6 273 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P19-201ENST00000517578 USP19O94966 1318 aa5.65□□□□□ -1.51
HMGB1P19-201ENST00000517578 LRPPRCP42704 1394 aaKnown RBP5.65□□□□□ -1.51
HMGB1P19-201ENST00000517578 POLR1AO95602 1720 aaPredicted RBP5.65□□□□□ -1.51
HMGB1P19-201ENST00000517578 COL17A1Q9UMD9 1497 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 ERICH4A6NGS2 130 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 A6NHS1 94 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 HMGB1P1B2RPK0 211 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 DDX3YO15523 660 aaKnown RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 FAM13AO94988 1023 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 SMC2O95347 1197 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 PCSK2P16519 638 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 RDXP35241 583 aaKnown RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 RWDD2BP57060 319 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 NFIAQ12857 509 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 ALKBH2Q6NS38 261 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 LEKR1Q6ZMV7 388 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 ERC1Q8IUD2 1116 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 C10orf67Q8IYJ2 551 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 CCDC112Q8NEF3 446 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 FBXO18Q8NFZ0 1043 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 UBASH3BQ8TF42 649 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 SNRNP27Q8WVK2 155 aaKnown RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 DNAAF4Q8WXU2 420 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 TNPO1Q92973 898 aaKnown RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 UTP4Q969X6 686 aaKnown RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 DRC1Q96MC2 740 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 POP1Q99575 1024 aaKnown RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 ADAM19Q9H013 955 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 C7orf69Q9H7B7 122 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 A1CFQ9NQ94 594 aaKnown RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 KANSL3Q9P2N6 904 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 USP25Q9UHP3 1055 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms