RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 ZNF569Q5MCW4 686 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 USP49Q70CQ1 688 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 RHOXF2Q9BQY4 288 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 CDKL5O76039 1030 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 ZFYP08048 801 aaPredicted RBP14.12□□□□□ -0.15
PCM1-203ENST00000517545 GUCY1A2P33402 732 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 TRIM29Q14134 588 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 NUTM2AQ8IVF1 878 aaPredicted RBP14.12□□□□□ -0.15
PCM1-203ENST00000517545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.12□□□□□ -0.15
PCM1-203ENST00000517545 SLC26A6Q9BXS9 759 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 CDC23Q9UJX2 597 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 FAN1Q9Y2M0 1017 aa14.12□□□□□ -0.15
PCM1-203ENST00000517545 RRP15Q9Y3B9 282 aaKnown RBP14.12□□□□□ -0.15
PCM1-203ENST00000517545 CYP27B1O15528 508 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 SARSP49591 514 aaKnown RBP14.11□□□□□ -0.15
PCM1-203ENST00000517545 MLKLQ8NB16 471 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 CWC15Q9P013 229 aaKnown RBP14.11□□□□□ -0.15
PCM1-203ENST00000517545 KCNJ14Q9UNX9 436 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 APPP05067 770 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
PCM1-203ENST00000517545 ATP2B1P20020 1258 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 STX17P56962 302 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 KLHL10Q6JEL2 608 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 NFXL1Q6ZNB6 911 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 IFNL2Q8IZJ0 200 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 A0A1B0GTH6 734 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 ZBTB43O43298 467 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 PHACTR2O75167 634 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 TNNT3P45378 269 aaPredicted RBP14.11□□□□□ -0.15
PCM1-203ENST00000517545 APTXQ7Z2E3 356 aaKnown RBP14.11□□□□□ -0.15
PCM1-203ENST00000517545 HDXQ7Z353 690 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 CDC5LQ99459 802 aaKnown RBP14.11□□□□□ -0.15
PCM1-203ENST00000517545 FBXO2Q9UK22 296 aaPredicted RBP14.11□□□□□ -0.15
PCM1-203ENST00000517545 L1RE1Q9UN81 338 aa14.11□□□□□ -0.15
PCM1-203ENST00000517545 WDR19Q8NEZ3 1342 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 SLIT3O75094 1523 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 MEGF6O75095 1541 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 GOLGA8AA7E2F4 631 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 KIF5CO60282 957 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 CIAO1O76071 339 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 VSNL1P62760 191 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 KIF4BQ2VIQ3 1234 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 NT5DC1Q5TFE4 455 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 CPLX2Q6PUV4 134 aaKnown RBP14.1□□□□□ -0.15
PCM1-203ENST00000517545 NOSTRINQ8IVI9 506 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 IGSF22Q8N9C0 903 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 HNRNPLLQ8WVV9 542 aaKnown RBP14.1□□□□□ -0.15
PCM1-203ENST00000517545 RAB21Q9UL25 225 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 A1BGP04217 495 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 CASP1P29466 404 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 PANX2Q96RD6 677 aa14.1□□□□□ -0.15
PCM1-203ENST00000517545 USP5P45974 858 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 SLC35F6Q8N357 371 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 CCDC82Q8N4S0 544 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 ACRBPQ8NEB7 543 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 IGDCC4Q8TDY8 1250 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 HOOK1Q9UJC3 728 aaKnown RBP14.09□□□□□ -0.15
PCM1-203ENST00000517545 PCDHB6Q9Y5E3 794 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 PTPREP23469 700 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 CEP112Q8N8E3 955 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 MSANTD4Q8NCY6 345 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 LY9Q9HBG7 655 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 SCN11AQ9UI33 1791 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 COBLO75128 1261 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
PCM1-203ENST00000517545 PLCD1P51178 756 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 LEKR1Q6ZMV7 388 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 DIS3L2Q8IYB7 885 aaKnown RBP14.09□□□□□ -0.15
PCM1-203ENST00000517545 IQUBQ8NA54 791 aa14.09□□□□□ -0.15
PCM1-203ENST00000517545 DDX60Q8IY21 1712 aaKnown RBP14.09□□□□□ -0.15
PCM1-203ENST00000517545 RGPD5Q99666 1765 aa14.08□□□□□ -0.15
PCM1-203ENST00000517545 CAMTA1Q9Y6Y1 1673 aa14.08□□□□□ -0.15
PCM1-203ENST00000517545 ACTN4O43707 911 aaKnown RBP14.08□□□□□ -0.16
PCM1-203ENST00000517545 CABP4P57796 275 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 NR5A1Q13285 461 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 CCDC57Q2TAC2 916 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 PPFIBP1Q86W92 1011 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 SMYD4Q8IYR2 804 aaPredicted RBP14.08□□□□□ -0.16
PCM1-203ENST00000517545 CMTR1Q8N1G2 835 aaKnown RBP14.08□□□□□ -0.16
PCM1-203ENST00000517545 DACH1Q9UI36 760 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 CASP14P31944 242 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 MCAMP43121 646 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 TMEM67Q5HYA8 995 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 CERS3Q8IU89 383 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 DCAF5Q96JK2 942 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 NOA1Q8NC60 698 aaKnown RBP14.08□□□□□ -0.16
PCM1-203ENST00000517545 CCDC102AQ96A19 550 aa14.08□□□□□ -0.16
PCM1-203ENST00000517545 LMTK3Q96Q04 1460 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 ANKRD65E5RJM6 399 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 AFMP43652 599 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 FXR1P51114 621 aaKnown RBP eCLIP14.07□□□□□ -0.16
PCM1-203ENST00000517545 SSRP1Q08945 709 aaKnown RBP14.07□□□□□ -0.16
PCM1-203ENST00000517545 CASP8Q14790 479 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 ELOA2Q8IYF1 753 aaPredicted RBP14.07□□□□□ -0.16
PCM1-203ENST00000517545 RGS22Q8NE09 1264 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 AKAP2Q9Y2D5 859 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 SPEF2Q9C093 1822 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 A0A087X0B3 334 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 CTAGE9A4FU28 777 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms