RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CSRNP1Q96S65 589 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 USP26Q9BXU7 913 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 NAPBQ9H115 298 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 ANAPC4Q9UJX5 808 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
CLN8-202ENST00000517514 PHF20L1A8MW92 1017 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 USP2O75604 605 aaPredicted RBP11.8□□□□□ -0.52
CLN8-202ENST00000517514 CYP21A2P08686 494 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 SHMT1P34896 483 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 TDO2P48775 406 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 CTDSPL2Q05D32 466 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 PPARAQ07869 468 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 SHROOM1Q2M3G4 852 aaPredicted RBP11.8□□□□□ -0.52
CLN8-202ENST00000517514 CASC1Q6TDU7 716 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 MOB2Q70IA6 237 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 MIGA2Q7L4E1 593 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 TBC1D10CQ8IV04 446 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 KCNB2Q92953 911 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 EHD4Q9H223 541 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 DHX36Q9H2U1 1008 aaKnown RBP11.8□□□□□ -0.52
CLN8-202ENST00000517514 ARPP21Q9UBL0 812 aaPredicted RBP11.8□□□□□ -0.52
CLN8-202ENST00000517514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLN8-202ENST00000517514 DOCK1Q14185 1865 aa11.8□□□□□ -0.52
CLN8-202ENST00000517514 MINDY4BA8MYZ0 360 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 TBC1D12O60347 775 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 POLR3DP05423 398 aaPredicted RBP11.79□□□□□ -0.52
CLN8-202ENST00000517514 FGRP09769 529 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 HAND2P61296 217 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 STOX1Q6ZVD7 989 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 C16orf86Q6ZW13 317 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 ZSCAN29Q8IWY8 852 aaPredicted RBP11.79□□□□□ -0.52
CLN8-202ENST00000517514 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 NACAP1Q9BZK3 213 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 PI4KBQ9UBF8 816 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 ZNF112Q9UJU3 913 aa11.79□□□□□ -0.52
CLN8-202ENST00000517514 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
CLN8-202ENST00000517514 SLC27A2O14975 620 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 CDK8P49336 464 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 FSTL1Q12841 308 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 MAP3K11Q16584 847 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 CREB3L3Q68CJ9 461 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 TATDN1Q6P1N9 297 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 FOXP4Q8IVH2 680 aaPredicted RBP11.78□□□□□ -0.52
CLN8-202ENST00000517514 STK11IPQ8N1F8 1099 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 SERPINB13Q9UIV8 391 aa11.78□□□□□ -0.52
CLN8-202ENST00000517514 HLA-DOAP06340 250 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 RASA1P20936 1047 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 HSPA4P34932 840 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 PRKG1Q13976 671 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 SUPT20HL1Q3ZLR7 823 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.77□□□□□ -0.53
CLN8-202ENST00000517514 KIAA1211Q6ZU35 1233 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLN8-202ENST00000517514 KLRG1Q96E93 195 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLN8-202ENST00000517514 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.77□□□□□ -0.53
CLN8-202ENST00000517514 HERC5Q9UII4 1024 aaKnown RBP11.77□□□□□ -0.53
CLN8-202ENST00000517514 NEDD4P46934 1319 aa11.77□□□□□ -0.53
CLN8-202ENST00000517514 ZNF213O14771 459 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 EPB41L2O43491 1005 aaKnown RBP11.76□□□□□ -0.53
CLN8-202ENST00000517514 PRDM1O75626 825 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 REC8O95072 547 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 CELF2O95319 508 aaKnown RBP11.76□□□□□ -0.53
CLN8-202ENST00000517514 INPP5BP32019 993 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 STAG1Q8WVM7 1258 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 ZNF408Q9H9D4 720 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 CTNNA3Q9UI47 895 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 PTPRFP10586 1907 aa11.76□□□□□ -0.53
CLN8-202ENST00000517514 E7EWF7 191 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 UBE2Q2LH0YL09 131 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 ORC4O43929 436 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 AKR1B1P15121 316 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 IMMTQ16891 758 aaKnown RBP11.75□□□□□ -0.53
CLN8-202ENST00000517514 ADCK5Q3MIX3 580 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 AKNAD1Q5T1N1 836 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 ZKSCAN4Q969J2 545 aaPredicted RBP11.75□□□□□ -0.53
CLN8-202ENST00000517514 IL17RAQ96F46 866 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 CLMNQ96JQ2 1002 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 ZNF341Q9BYN7 854 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLN8-202ENST00000517514 GBA2Q9HCG7 927 aaPredicted RBP11.75□□□□□ -0.53
CLN8-202ENST00000517514 ANGEL1Q9UNK9 670 aaKnown RBP11.75□□□□□ -0.53
CLN8-202ENST00000517514 SNX14Q9Y5W7 946 aa11.75□□□□□ -0.53
CLN8-202ENST00000517514 MYH4Q9Y623 1939 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 GDF11O95390 407 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 CAP2P40123 477 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 DCAF15Q66K64 600 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 CCDC84Q86UT8 332 aaPredicted RBP11.74□□□□□ -0.53
CLN8-202ENST00000517514 SIAH1Q8IUQ4 282 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
CLN8-202ENST00000517514 WRNIP1Q96S55 665 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 KIF2CQ99661 725 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms