RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ANKRD26Q9UPS8 1709 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 BMP15O95972 392 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 OAS2P29728 719 aaKnown RBP12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 OGFOD1Q8N543 542 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 COPRSQ9NQ92 184 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 TAF6LQ9Y6J9 622 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 SETD1BQ9UPS6 1966 aaKnown RBP12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 A0A1W2PQ27 194 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 A0A1W2PQ64 194 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 A0A1W2PQD8 194 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 TNNI2P48788 182 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 PXDNLA1KZ92 1463 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 CARMIL3Q8ND23 1372 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 PRPF4BQ13523 1007 aaKnown RBP12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 PYM1Q9BRP8 204 aaKnown RBP12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 MORC2Q9Y6X9 1032 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 KIAA0754O94854 1291 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 IQCB1Q15051 598 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 SPECC1Q5M775 1068 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 CCDC113Q9H0I3 377 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 KCNH3Q9ULD8 1083 aa12.25□□□□□ -0.45
PCDHGA1-202ENST00000517417 CLCN6P51797 869 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 VPS18Q9P253 973 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 C3P01024 1663 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 ZAP70P43403 619 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 GOLGA8FQ08AF8 430 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 GOLGA8DPQ0D2H9 430 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 PTPN21Q16825 1174 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 DHX40Q8IX18 779 aaKnown RBP12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 APPBP2Q92624 585 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 DRC1Q96MC2 740 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 POTEJP0CG39 1038 aa12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 HLTFQ14527 1009 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 KRI1Q8N9T8 703 aaKnown RBP12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 CTNNBL1Q8WYA6 563 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA1-202ENST00000517417 PSMA7O14818 248 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 RBM6P78332 1123 aaKnown RBP12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CEP112Q8N8E3 955 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 LINC00301Q8NCQ3 95 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 NEK11Q8NG66 645 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 SPAG5Q96R06 1193 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 RMND1Q9NWS8 449 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 SAP30BPQ9UHR5 308 aaKnown RBP12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 PDE8AO60658 829 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 TBCAO75347 108 aaKnown RBP12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 SEC31AO94979 1220 aaKnown RBP12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 ST3GAL1Q11201 340 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CETN1Q12798 172 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 PUM3Q15397 648 aaKnown RBP12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 ZNF569Q5MCW4 686 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 ALDH8A1Q9H2A2 487 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 VEZTQ9HBM0 779 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CTAGE15A4D2H0 777 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CTAGE8P0CG41 777 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CAPN2P17655 700 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CMA1P23946 247 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 ZNF174Q15697 407 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 KRT40Q6A162 431 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 PPP4R3AQ6IN85 833 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CTAGE6Q86UF2 777 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CTAGE4Q8IX94 777 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 PHKBQ93100 1093 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 VWA3AA6NCI4 1184 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 VGLL3A8MV65 326 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 RHOXF2BP0C7M4 288 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 CALML3P27482 149 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 FAM114A1Q8IWE2 563 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 RHOXF2Q9BQY4 288 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 NFE2L3Q9Y4A8 694 aa12.23□□□□□ -0.45
PCDHGA1-202ENST00000517417 EFCAB8A8MWE9 144 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CALM1P0DP23 149 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CALM2P0DP24 149 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CALM3P0DP25 149 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 ADKP55263 362 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 ARID5AQ03989 594 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 FBXO18Q8NFZ0 1043 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 C6orf50Q9HD87 102 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 ANGEL1Q9UNK9 670 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 PPP2R2CQ9Y2T4 447 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CTAGE9A4FU28 777 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 AKR1B15C9JRZ8 316 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 KRT2P35908 639 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CCZ1BP86790 482 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CCZ1P86791 482 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 SMC1AQ14683 1233 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 EPHA10Q5JZY3 1008 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 TRAPPC3LQ5T215 181 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 EHMT1Q9H9B1 1298 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 FANCLQ9NW38 375 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CETN2P41208 172 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 EIF6P56537 245 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms