RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 PCDHGC5Q9Y5F6 944 aa9.28□□□□□ -0.92
CPNE3-201ENST00000517354 FAM221AA4D161 298 aa9.27□□□□□ -0.93
CPNE3-201ENST00000517354 GREM1O60565 184 aa9.27□□□□□ -0.93
CPNE3-201ENST00000517354 CDK8P49336 464 aa9.27□□□□□ -0.93
CPNE3-201ENST00000517354 SEZ6Q53EL9 994 aa9.27□□□□□ -0.93
CPNE3-201ENST00000517354 CYFIP1Q7L576 1253 aa9.27□□□□□ -0.93
CPNE3-201ENST00000517354 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
CPNE3-201ENST00000517354 FAM83CQ9BQN1 747 aa9.27□□□□□ -0.93
CPNE3-201ENST00000517354 UBP1Q9NZI7 540 aa9.27□□□□□ -0.93
CPNE3-201ENST00000517354 GARTP22102 1010 aa9.26□□□□□ -0.93
CPNE3-201ENST00000517354 MLECQ14165 292 aa9.26□□□□□ -0.93
CPNE3-201ENST00000517354 PRR23CQ6ZRP0 262 aa9.26□□□□□ -0.93
CPNE3-201ENST00000517354 GIMAP7Q8NHV1 300 aa9.26□□□□□ -0.93
CPNE3-201ENST00000517354 FBXO27Q8NI29 283 aa9.26□□□□□ -0.93
CPNE3-201ENST00000517354 WNT10AQ9GZT5 417 aa9.26□□□□□ -0.93
CPNE3-201ENST00000517354 GSX1Q9H4S2 264 aaPredicted RBP9.26□□□□□ -0.93
CPNE3-201ENST00000517354 KCNQ5Q9NR82 932 aa9.26□□□□□ -0.93
CPNE3-201ENST00000517354 TACC3Q9Y6A5 838 aa9.26□□□□□ -0.93
CPNE3-201ENST00000517354 GFRA2O00451 464 aa9.25□□□□□ -0.93
CPNE3-201ENST00000517354 GRK4P32298 578 aa9.25□□□□□ -0.93
CPNE3-201ENST00000517354 PAK2Q13177 524 aa9.25□□□□□ -0.93
CPNE3-201ENST00000517354 EAF1Q96JC9 268 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-201ENST00000517354 ACBD3Q9H3P7 528 aa9.25□□□□□ -0.93
CPNE3-201ENST00000517354 ACSS3Q9H6R3 686 aa9.25□□□□□ -0.93
CPNE3-201ENST00000517354 CAPN10Q9HC96 672 aa9.25□□□□□ -0.93
CPNE3-201ENST00000517354 IGSF5Q9NSI5 407 aa9.25□□□□□ -0.93
CPNE3-201ENST00000517354 PROCP04070 461 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 PGRP06401 933 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 ZNF165P49910 485 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 ZBTB37Q5TC79 503 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 REC114Q7Z4M0 266 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 HID1Q8IV36 788 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 ISL2Q96A47 359 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
CPNE3-201ENST00000517354 HMX2A2RU54 273 aa9.23□□□□□ -0.93
CPNE3-201ENST00000517354 PLCG1P19174 1290 aa9.23□□□□□ -0.93
CPNE3-201ENST00000517354 RING1Q06587 406 aa9.23□□□□□ -0.93
CPNE3-201ENST00000517354 EZH1Q92800 747 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-201ENST00000517354 GPRASP2Q96D09 838 aa9.23□□□□□ -0.93
CPNE3-201ENST00000517354 SEMA6CQ9H3T2 930 aa9.23□□□□□ -0.93
CPNE3-201ENST00000517354 C7orf69Q9H7B7 122 aa9.23□□□□□ -0.93
CPNE3-201ENST00000517354 BRMS1Q9HCU9 246 aa9.23□□□□□ -0.93
CPNE3-201ENST00000517354 GRIN3BO60391 1043 aa9.22□□□□□ -0.93
CPNE3-201ENST00000517354 FURINP09958 794 aa9.22□□□□□ -0.93
CPNE3-201ENST00000517354 RAD51AP2Q09MP3 1159 aa9.22□□□□□ -0.93
CPNE3-201ENST00000517354 GSC2O15499 205 aa9.21□□□□□ -0.94
CPNE3-201ENST00000517354 NEFMP07197 916 aa9.21□□□□□ -0.94
CPNE3-201ENST00000517354 GK5Q6ZS86 529 aa9.21□□□□□ -0.94
CPNE3-201ENST00000517354 LRRC3Q9BY71 257 aa9.21□□□□□ -0.94
CPNE3-201ENST00000517354 CRKP46108 304 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 FBXW10Q5XX13 1052 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 RNF43Q68DV7 783 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 FBXL6Q8N531 539 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 TBC1D32Q96NH3 1257 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 SEMA6BQ9H3T3 888 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 ATG3Q9NT62 314 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 PCDHB14Q9Y5E9 798 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 CORINQ9Y5Q5 1042 aa9.2□□□□□ -0.94
CPNE3-201ENST00000517354 TNNI2P48788 182 aa9.19□□□□□ -0.94
CPNE3-201ENST00000517354 RSPO4Q2I0M5 234 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-201ENST00000517354 SLITRK4Q8IW52 837 aa9.19□□□□□ -0.94
CPNE3-201ENST00000517354 CPLX3Q8WVH0 158 aa9.19□□□□□ -0.94
CPNE3-201ENST00000517354 FERD3LQ96RJ6 166 aa9.19□□□□□ -0.94
CPNE3-201ENST00000517354 CRBNQ96SW2 442 aa9.19□□□□□ -0.94
CPNE3-201ENST00000517354 ADAM30Q9UKF2 790 aa9.19□□□□□ -0.94
CPNE3-201ENST00000517354 YARSP54577 528 aaKnown RBP9.18□□□□□ -0.94
CPNE3-201ENST00000517354 COL9A2Q14055 689 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-201ENST00000517354 NKAPLQ5M9Q1 402 aa9.18□□□□□ -0.94
CPNE3-201ENST00000517354 DUSP27Q5VZP5 1158 aa9.18□□□□□ -0.94
CPNE3-201ENST00000517354 SLC51AQ86UW1 340 aa9.18□□□□□ -0.94
CPNE3-201ENST00000517354 REXO1Q8N1G1 1221 aaKnown RBP9.18□□□□□ -0.94
CPNE3-201ENST00000517354 MFSD14AQ96MC6 490 aa9.18□□□□□ -0.94
CPNE3-201ENST00000517354 FOXQ1Q9C009 403 aa9.18□□□□□ -0.94
CPNE3-201ENST00000517354 EFR3BQ9Y2G0 817 aa9.18□□□□□ -0.94
CPNE3-201ENST00000517354 POLR3KQ9Y2Y1 108 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-201ENST00000517354 HTR3BO95264 441 aa9.17□□□□□ -0.94
CPNE3-201ENST00000517354 IGLV1-40P01703 118 aa9.17□□□□□ -0.94
CPNE3-201ENST00000517354 FSTP19883 344 aa9.17□□□□□ -0.94
CPNE3-201ENST00000517354 CHMP4BP1P59074 171 aa9.17□□□□□ -0.94
CPNE3-201ENST00000517354 ZC3H6P61129 1189 aaKnown RBP9.17□□□□□ -0.94
CPNE3-201ENST00000517354 SLC6A19Q695T7 634 aa9.17□□□□□ -0.94
CPNE3-201ENST00000517354 REV1Q9UBZ9 1251 aa9.17□□□□□ -0.94
CPNE3-201ENST00000517354 PRKAG2Q9UGJ0 569 aa9.17□□□□□ -0.94
CPNE3-201ENST00000517354 KLHL3Q9UH77 587 aa9.17□□□□□ -0.94
CPNE3-201ENST00000517354 DYNC1LI2O43237 492 aaPredicted RBP9.16□□□□□ -0.94
CPNE3-201ENST00000517354 DYRK3O43781 588 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 LRIG2O94898 1065 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 CYP27A1Q02318 531 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 CLCQ05315 142 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 NFIAQ12857 509 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 CDK5R2Q13319 367 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 LRRFIP1Q32MZ4 808 aaKnown RBP9.16□□□□□ -0.94
CPNE3-201ENST00000517354 CYP27C1Q4G0S4 372 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 MCATQ8IVS2 390 aaKnown RBP9.16□□□□□ -0.94
CPNE3-201ENST00000517354 FAM13CQ8NE31 585 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 TMEM87BQ96K49 555 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 FBRSQ9HAH7 460 aa9.16□□□□□ -0.94
CPNE3-201ENST00000517354 GINM1Q9NU53 330 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms