RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PRAMEF27A3QJZ7 478 aa5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PRPF40AO75400 957 aaKnown RBP5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ZNF792Q3KQV3 632 aa5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 EAPPQ56P03 285 aaPredicted RBP5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ZBTB37Q5TC79 503 aa5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ANGEL2Q5VTE6 544 aaKnown RBP5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 TTBK2Q6IQ55 1244 aa5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 AEBP1Q8IUX7 1158 aa5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ASB11Q8WXH4 323 aa5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 SNCAIPQ9Y6H5 919 aa5.28□□□□□ -1.56
RNU6-1088P-201ENST00000516850 IGF2BP3O00425 579 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 LRIG2O94898 1065 aa5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 FUT4P22083 530 aa5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 ETF1P62495 437 aaKnown RBP5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 RING1Q06587 406 aa5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 COL19A1Q14993 1142 aa5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 CCDC85BQ15834 202 aaPredicted RBP5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 KRTAP4-12Q9BQ66 201 aa5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 RC3H2Q9HBD1 1191 aaKnown RBP5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PRDM5Q9NQX1 630 aaPredicted RBP5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 AK5Q9Y6K8 562 aa5.27□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PDIA4P13667 645 aaKnown RBP5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 INPP5AQ14642 412 aa5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 LRFN4Q6PJG9 635 aa5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 ARMCX6Q7L4S7 300 aa5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PLPPR2Q96GM1 343 aa5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 HEXIM2Q96MH2 286 aaKnown RBP5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 FOXQ1Q9C009 403 aa5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 TPX2Q9ULW0 747 aaKnown RBP5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PLAGL2Q9UPG8 496 aa5.26□□□□□ -1.57
RNU6-1088P-201ENST00000516850 ANKRD33BA6NCL7 494 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 ITGB5P18084 799 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 CD96P40200 585 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 RPS26P62854 115 aaKnown RBP5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 IKZF1Q13422 519 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 RASIP1Q5U651 963 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 ZNF746Q6NUN9 644 aaPredicted RBP5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 ATG4DQ86TL0 474 aaPredicted RBP5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 KRTAP1-3Q8IUG1 177 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 MFSD2AQ8NA29 543 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 DUSP9Q99956 384 aaKnown RBP5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 WNT10AQ9GZT5 417 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 TNKS2Q9H2K2 1166 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 MAPK8IP1Q9UQF2 711 aa5.25□□□□□ -1.57
RNU6-1088P-201ENST00000516850 BTBD11A6QL63 1104 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 FAM155AB1AL88 458 aaPredicted RBP5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 RNASE1P07998 156 aaKnown RBP5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 RLBP1P12271 317 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 CYP7A1P22680 504 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 NTF4P34130 210 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 CLCN7P51798 805 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 XPCQ01831 940 aaPredicted RBP5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 WIPI1Q5MNZ9 446 aaPredicted RBP5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 SFRP5Q5T4F7 317 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 OGFOD2Q6N063 350 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 SLC23A3Q6PIS1 610 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 SND1Q7KZF4 910 aaKnown RBP eCLIP5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 CYFIP1Q7L576 1253 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 HID1Q8IV36 788 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 MIPEPQ99797 713 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 MIR1-1HGQ9H1L0 117 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 U3KQE9 123 aa5.24□□□□□ -1.57
RNU6-1088P-201ENST00000516850 EOMESO95936 686 aa5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 ITGAEP38570 1179 aa5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 ZP2Q05996 745 aa5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PTPN11Q06124 597 aaPredicted RBP5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PSMD2Q13200 908 aa5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 MAP3K11Q16584 847 aa5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 FAM214BQ7L5A3 538 aa5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 UBE3DQ7Z6J8 389 aa5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 WFDC3Q8IUB2 231 aa5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 MBNL3Q9NUK0 354 aaKnown RBP5.23□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PAPLNO95428 1278 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 GRK4P32298 578 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 LIG3P49916 1009 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PDE4BQ07343 736 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 AGMOQ6ZNB7 445 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 SPACA3Q8IXA5 215 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 FAM168AQ92567 244 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 GAL3ST3Q96A11 431 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PARP2Q9UGN5 583 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 PCDHB5Q9Y5E4 795 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 TACC3Q9Y6A5 838 aa5.22□□□□□ -1.57
RNU6-1088P-201ENST00000516850 SLITRK5O94991 958 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 PGRP06401 933 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 CAP2P40123 477 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 SEPT6Q14141 434 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 SLBPQ14493 270 aaKnown RBP eCLIP5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 TAF1CQ15572 869 aaPredicted RBP5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 NKPD1Q17RQ9 610 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 TSNAXIP1Q2TAA8 658 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 CDKAL1Q5VV42 579 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 LETMD1Q6P1Q0 360 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 MFSD4AQ8N468 514 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 LRRN4CLQ8ND94 238 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 XAGE3Q8WTP9 111 aa5.21□□□□□ -1.58
RNU6-1088P-201ENST00000516850 COX4I2Q96KJ9 171 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms