RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 CSF1RP07333 972 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PNMA6AP0CW24 399 aaPredicted RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CALML3P27482 149 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LMOD1P29536 600 aaPredicted RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CTSWP56202 376 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PPP2R3AQ06190 1150 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CKAP4Q07065 602 aaKnown RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SLC39A6Q13433 755 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 WTAPQ15007 396 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 RTN1Q16799 776 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 WHAMMP3Q1A5X7 153 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KMT5BQ4FZB7 885 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC178Q5BJE1 867 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 EPHA10Q5JZY3 1008 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 AXDND1Q5T1B0 1012 aaPredicted RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SLC9C2Q5TAH2 1124 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 E4F1Q66K89 784 aaPredicted RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KRT40Q6A162 431 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ARMCX5Q6P1M9 558 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LDHAL6AQ6ZMR3 332 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC129Q6ZRS4 1044 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MFSD6Q6ZSS7 791 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 HDXQ7Z353 690 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NBPF11Q86T75 865 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MICU3Q86XE3 530 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 IQCA1Q86XH1 822 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CERS3Q8IU89 383 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TMTC1Q8IUR5 882 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FAM114A1Q8IWE2 563 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MPNDQ8N594 471 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 RETREG2Q8NC44 543 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KLHDC4Q8TBB5 520 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NOC3LQ8WTT2 800 aaKnown RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 STAG1Q8WVM7 1258 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LPIN2Q92539 896 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ESR2Q92731 530 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CDC5LQ99459 802 aaKnown RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ARID3AQ99856 593 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ISCA1Q9BUE6 129 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CARD10Q9BWT7 1032 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LRRC2Q9BYS8 371 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TSGA10Q9BZW7 698 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NCOA5Q9HCD5 579 aaKnown RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CNNM1Q9NRU3 951 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TRMT1Q9NXH9 659 aaKnown RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 AATFQ9NY61 560 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FAM53CQ9NYF3 392 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TMOD3Q9NYL9 352 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PPP2R2CQ9Y2T4 447 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NFE2L3Q9Y4A8 694 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SRPRBQ9Y5M8 271 aaKnown RBP3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MRFAP1Q9Y605 127 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CLIC4Q9Y696 253 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SPATA31A3Q5VYP0 1347 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DISP2A7MBM2 1401 aa3.84□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NHSL1Q5SYE7 1610 aa3.84□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 A0A1B0GUL6 1792 aa3.84□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 A0A1B0GTH6 734 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 PRAMEF22A3QJZ6 481 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CTAGE15A4D2H0 777 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 TRIM75PA6NK02 468 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 PATL2C9JE40 543 aaKnown RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 ATP5J2-PTCD1G3V325 749 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 IFIT3O14879 490 aaKnown RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CYP27B1O15528 508 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 PTCD1O75127 700 aaKnown RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 IDH1O75874 414 aaKnown RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CLSTN1O94985 981 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 PDE8BO95263 885 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CTAGE8P0CG41 777 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 FDPSP14324 419 aaKnown RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 ZNF18P17022 549 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 ITGA6P23229 1130 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 PTPREP23469 700 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 KIF5BP33176 963 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CYP2C19P33261 490 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 KRT2P35908 639 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 TDO2P48775 406 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CLCN6P51797 869 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CHMP4BP1P59074 171 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 GNG11P61952 73 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 KRT83P78385 493 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 MAP3K9P80192 1104 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 GUCY1B3Q02153 619 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 ORC2Q13416 577 aaPredicted RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 NCAPHQ15003 741 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 PTPAQ15257 358 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 PARP10Q53GL7 1025 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 AKNAD1Q5T1N1 836 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 SPATA1Q5VX52 437 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 ARL6IP4Q66PJ3 421 aaKnown RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 GALNT17Q6IS24 598 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CYP26C1Q6V0L0 522 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 GIGYF2Q6Y7W6 1299 aaKnown RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 ARHGAP27Q6ZUM4 889 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 TOM1L2Q6ZVM7 507 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 SRGAP1Q7Z6B7 1085 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CATIPQ7Z7H3 387 aa3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 ILDR1Q86SU0 546 aaPredicted RBP3.83□□□□□ -1.8
RNU4ATAC3P-201ENST00000516699 CTAGE6Q86UF2 777 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms