RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 NKX2-3Q8TAU0 364 aa10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 ALG1Q9BT22 464 aa10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 SENP2Q9HC62 589 aa10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 FAM217BQ9NTX9 383 aaPredicted RBP10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 DDX19AQ9NUU7 478 aaKnown RBP10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 TFIP11Q9UBB9 837 aaKnown RBP10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 POLLQ9UGP5 575 aa10.94□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 GPR75-ASB3A0A0A6YYF3 556 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 RANBP6O60518 1105 aaKnown RBP10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 DDAH1O94760 285 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 YEATS4O95619 227 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 STYK1Q6J9G0 422 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CATIPQ7Z7H3 387 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 MPNDQ8N594 471 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 FANCBQ8NB91 859 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 GPR101Q96P66 508 aaPredicted RBP10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 EYA3Q99504 573 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 RBM28Q9NW13 759 aaKnown RBP10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 STK32BQ9NY57 414 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 RTEL1Q9NZ71 1219 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 MKRN1Q9UHC7 482 aaKnown RBP10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 JAG2Q9Y219 1238 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 MYH1P12882 1939 aa10.93□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 GAKO14976 1311 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CYP2D7A0A087X1C5 515 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 DEXIO95424 95 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 RXRAP19793 462 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 GUCY1B3Q02153 619 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 KIF23Q02241 960 aaPredicted RBP10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CCDC173Q0VFZ6 552 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 IFIT1BQ5T764 474 aaKnown RBP10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 C12orf60Q5U649 245 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 KRT40Q6A162 431 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 ENAHQ8N8S7 591 aaPredicted RBP10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 BICD2Q8TD16 824 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 USP28Q96RU2 1077 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 ZKSCAN3Q9BRR0 538 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 MYL10Q9BUA6 226 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 SLC26A6Q9BXS9 759 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 RTFDC1Q9BY42 306 aaPredicted RBP10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 PANK2Q9BZ23 570 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 ZC3H12CQ9C0D7 883 aaKnown RBP10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 RBSNQ9H1K0 784 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 NUP62CLQ9H1M0 184 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 ZNF287Q9HBT7 754 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 MCM9Q9NXL9 1143 aa10.92□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 BTDP43251 543 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 AKAP17AQ02040 695 aaKnown RBP10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 SAFBQ15424 915 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 DIXDC1Q155Q3 683 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 SLC15A2Q16348 729 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 UVSSAQ2YD98 709 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 DPP8Q6V1X1 898 aaPredicted RBP10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 SLC51AQ86UW1 340 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CCDC144CPQ8IYA2 1237 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 STK11IPQ8N1F8 1099 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 KCNG4Q8TDN1 519 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 SH3RF3Q8TEJ3 882 aaPredicted RBP10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 PGBD1Q96JS3 809 aa10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 RNF26Q9BY78 433 aaPredicted RBP10.91□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 A0A1W2PQ27 194 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 A0A1W2PQ64 194 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 A0A1W2PQD8 194 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 TSPY2A6NKD2 308 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 H0YIN7 160 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 PRDM1O75626 825 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 USP17L8P0C7I0 530 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CYP2D6P10635 497 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 XBP1P17861 261 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 GNL2Q13823 731 aaKnown RBP10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 STK38Q15208 465 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 MAP3K11Q16584 847 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 OTUD7BQ6GQQ9 843 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CCDC73Q6ZRK6 1079 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 TEX11Q8IYF3 940 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CRACR2BQ8N4Y2 399 aaPredicted RBP10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 NUP133Q8WUM0 1156 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 ANKS1AQ92625 1134 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 PHKBQ93100 1093 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CNKSR1Q969H4 720 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CAMKK2Q96RR4 588 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 CLSTN2Q9H4D0 955 aa10.9□□□□□ -0.66
RNU4ATAC12P-201ENST00000516460 G3V3G9 751 aa10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 CTAGE5O15320 804 aa10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 PRPF3O43395 683 aaKnown RBP10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 POLR3DP05423 398 aaPredicted RBP10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 CCDC192P0DO97 292 aa10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 LIG1P18858 919 aa10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 U2AF2P26368 475 aaKnown RBP eCLIP10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 FKBP1AP62942 108 aaKnown RBP10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 GTF2IP78347 998 aa10.89□□□□□ -0.67
RNU4ATAC12P-201ENST00000516460 SF3A1Q15459 793 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms