RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 CPZQ66K79 652 aa2.67□□□□□ -1.98
SNORA40.13-201ENST00000516379 C16orf46Q6P387 395 aa2.67□□□□□ -1.98
SNORA40.13-201ENST00000516379 CRIP3Q6Q6R5 217 aa2.67□□□□□ -1.98
SNORA40.13-201ENST00000516379 LINC01356Q8N9X3 169 aa2.67□□□□□ -1.98
SNORA40.13-201ENST00000516379 PMEPA1Q969W9 287 aa2.67□□□□□ -1.98
SNORA40.13-201ENST00000516379 ISL2Q96A47 359 aa2.67□□□□□ -1.98
SNORA40.13-201ENST00000516379 MBD1Q9UIS9 605 aaPredicted RBP2.67□□□□□ -1.98
SNORA40.13-201ENST00000516379 LIG1P18858 919 aa2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 ATXN1P54253 815 aaKnown RBP2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 TIGD5Q53EQ6 642 aa2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 LRCH2Q5VUJ6 765 aa2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 ANKMY2Q8IV38 441 aa2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 TMEFF1Q8IYR6 380 aa2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 INTS4Q96HW7 963 aaKnown RBP2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 ARXQ96QS3 562 aa2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 C19orf44Q9H6X5 657 aa2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 ST14Q9Y5Y6 855 aa2.66□□□□□ -1.98
SNORA40.13-201ENST00000516379 PRR33A8MZF0 331 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 H3BS24 57 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 IRS4O14654 1257 aaPredicted RBP2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 EREGO14944 169 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 ZNF862O60290 1169 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 ZNF20P17024 532 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 EPHB3P54753 998 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 UBXN11Q5T124 520 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 LARP1Q6PKG0 1096 aaKnown RBP2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 NUDT16Q96DE0 195 aaKnown RBP2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 FOXQ1Q9C009 403 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 ADAMTS10Q9H324 1103 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 CCDC86Q9H6F5 360 aaKnown RBP2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 PRDM10Q9NQV6 1147 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 LATS2Q9NRM7 1088 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 MAPK8IP1Q9UQF2 711 aa2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 YBX2Q9Y2T7 364 aaKnown RBP2.65□□□□□ -1.99
SNORA40.13-201ENST00000516379 A0A096LPE4 126 aa2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 A0A1W2PPZ6 126 aa2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 B3GALT4O96024 378 aa2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 SLFN14P0C7P3 912 aa2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 EDN3P14138 238 aa2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 KIF4BQ2VIQ3 1234 aa2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 CDKAL1Q5VV42 579 aa2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 LILRA2Q8N149 483 aa2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 RBM15Q96T37 977 aaKnown RBP eCLIP2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 CWC22Q9HCG8 908 aaKnown RBP2.64□□□□□ -1.99
SNORA40.13-201ENST00000516379 N4BP3O15049 544 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 FZD7O75084 574 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 ESR1P03372 595 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 ITGB3P05106 788 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 C22orf34Q6ZV56 151 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 THAP5Q7Z6K1 395 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 FERMT3Q86UX7 667 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 FAM129CQ86XR2 697 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 GGNBP2Q9H3C7 697 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 PRDM5Q9NQX1 630 aaPredicted RBP2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 C11orf21Q9P2W6 132 aa2.63□□□□□ -1.99
SNORA40.13-201ENST00000516379 FAM196BA6NMK8 535 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 KRTAP29-1A8MX34 341 aaPredicted RBP2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L15C9J2P7 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L10C9JJH3 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L13C9JLJ4 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L12C9JPN9 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L11C9JVI0 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L21D6R901 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L18D6R9N7 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L22D6RA61 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L17D6RBQ6 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L19D6RCP7 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L20D6RJB6 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 GRIA4P48058 902 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 KCNC1P48547 511 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 USP17L24Q0WX57 530 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 NR0B2Q15466 257 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 SMN1Q16637 294 aaKnown RBP2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 SPRED3Q2MJR0 410 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 CNKSR3Q6P9H4 555 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 SPRED1Q7Z699 444 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 PDZD8Q8NEN9 1154 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 ING1Q9UK53 422 aaPredicted RBP2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 COG6Q9Y2V7 657 aa2.62□□□□□ -1.99
SNORA40.13-201ENST00000516379 A0A1W2PP55 124 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 A6NHS1 94 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 POM121CA8CG34 1229 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 FAM155AB1AL88 458 aaPredicted RBP2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 PDE6BP35913 854 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 SLURP1P55000 103 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 SRSF3P84103 164 aaKnown RBP2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 KLF10Q13118 480 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 AP3B2Q13367 1082 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 KANK4Q5T7N3 995 aaPredicted RBP2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 CAPN12Q6ZSI9 719 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 CCNJLQ8IV13 435 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 MFSD4AQ8N468 514 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 TTC9BQ8N6N2 239 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 RNF214Q8ND24 703 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 DDX54Q8TDD1 881 aaKnown RBP2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 UBE2FQ969M7 185 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 SHISA4Q96DD7 197 aa2.61□□□□□ -1.99
SNORA40.13-201ENST00000516379 CNTD2Q9H8S5 307 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms