RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ZBTB43O43298 467 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PRDM1O75626 825 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RAD17O75943 681 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 VIL1P09327 827 aaKnown RBP8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PDIA4P13667 645 aaKnown RBP8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PDCP20941 246 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PKP1Q13835 747 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 WTAPQ15007 396 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SLC4A8Q2Y0W8 1093 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 APOBEC3HQ6NTF7 200 aaKnown RBP8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CDC42EP5Q6NZY7 148 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SYNE3Q6ZMZ3 975 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SGMS1Q86VZ5 419 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 IQCA1Q86XH1 822 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TMTC2Q8N394 836 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NLGN2Q8NFZ4 835 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 JDP2Q8WYK2 163 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZKSCAN3Q9BRR0 538 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 LY9Q9HBG7 655 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZNF287Q9HBT7 754 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 HDAC9Q9UKV0 1011 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 KIF3AQ9Y496 699 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 LTBP3Q9NS15 1303 aa8.96□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MYH6P13533 1939 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DICER1Q9UPY3 1922 aaKnown RBP8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NFKBIEO00221 500 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PSMD14O00487 310 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 STX6O43752 255 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 WDHD1O75717 1129 aaPredicted RBP8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 BRD1O95696 1058 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SYT1P21579 422 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 METAP2P50579 478 aaKnown RBP eCLIP8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PLCD1P51178 756 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 HMGN5P82970 282 aaKnown RBP8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 EVX2Q03828 476 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PICALMQ13492 652 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 APOA5Q6Q788 366 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TTC6Q86TZ1 520 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FAM184AQ8NB25 1140 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NSUN7Q8NE18 718 aaKnown RBP8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SMARCC2Q8TAQ2 1214 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DYNLL2Q96FJ2 89 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZSCAN10Q96SZ4 725 aaPredicted RBP8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ANP32EQ9BTT0 268 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MKNK2Q9HBH9 465 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NCOA5Q9HCD5 579 aaKnown RBP8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 HPS5Q9UPZ3 1129 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZDHHC9Q9Y397 364 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SLC12A7Q9Y666 1083 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TNKSO95271 1327 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TCHHQ07283 1943 aa8.95□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PTPDC1A2A3K4 754 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TSPY2A6NKD2 308 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 GOLGA8AA7E2F4 631 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DDX11L8A8MPP1 907 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CPLX1O14810 134 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 JAK2O60674 1132 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MCM4P33991 863 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SEC23AQ15436 765 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CFAP100Q494V2 611 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 IFIT1BQ5T764 474 aaKnown RBP8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 LARP1BQ659C4 914 aaKnown RBP8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CIAPIN1Q6FI81 312 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CPLX2Q6PUV4 134 aaKnown RBP8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 C16orf86Q6ZW13 317 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MICU3Q86XE3 530 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RAB11FIP4Q86YS3 637 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZNF444Q8N0Y2 327 aaPredicted RBP8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ENAHQ8N8S7 591 aaPredicted RBP8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 AGBL3Q8NEM8 1001 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FOXD4L4Q8WXT5 416 aaPredicted RBP8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DDX11Q96FC9 970 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 GMLQ99445 158 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 OSBPL5Q9H0X9 879 aaPredicted RBP8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
SCARNA20.1-201ENST00000516009 VPS37CA5D8V6 355 aaPredicted RBP8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 GOLGA6L22H0YM25 854 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DTNBO60941 627 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NPM3O75607 178 aaKnown RBP8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CDKL5O76039 1030 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 BAG4O95429 457 aaKnown RBP8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CTDNEP1O95476 244 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 HLA-DOAP06340 250 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZSCAN22P10073 491 aaPredicted RBP8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RXRAP19793 462 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PTMSP20962 102 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CDK8P49336 464 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RCAN1P53805 252 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TFAP4Q01664 338 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CXCL9Q07325 125 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TNIP1Q15025 636 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CCDC178Q5BJE1 867 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FAM47AQ5JRC9 791 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CLEC17AQ6ZS10 378 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZNF654Q8IZM8 581 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SLC44A5Q8NCS7 719 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DDX4Q9NQI0 724 aaKnown RBP8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TMOD2Q9NZR1 351 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms