RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 NLRC3Q7RTR2 1065 aa5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 DHX37Q8IY37 1157 aaKnown RBP5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 VWA5B2Q8N398 1253 aa5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 NINJ1Q92982 152 aa5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 TRERF1Q96PN7 1200 aa5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 AVENQ9NQS1 362 aaPredicted RBP5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 KRT82Q9NSB4 513 aa5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 FAN1Q9Y2M0 1017 aa5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 SLC12A7Q9Y666 1083 aa5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 TACC3Q9Y6A5 838 aa5.93□□□□□ -1.46
RNU6-488P-201ENST00000515918 FAM86C2PA6NEL3 165 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 CHURC1-FNTBB4DL54 471 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 TM4SF5O14894 197 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 MAOBP27338 520 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 POU4F3Q15319 338 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 TXNDC11Q6PKC3 985 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 HDXQ7Z353 690 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 FERMT3Q86UX7 667 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 FCHSD1Q86WN1 690 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 NIM1KQ8IY84 436 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 SLC7A3Q8WY07 619 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 MFSD3Q96ES6 412 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 ACSBG1Q96GR2 724 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 PHAXQ9H814 394 aaKnown RBP5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 ATP8A1Q9Y2Q0 1164 aa5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 THRAP3Q9Y2W1 955 aaKnown RBP5.92□□□□□ -1.46
RNU6-488P-201ENST00000515918 DCDC2CA8MYV0 355 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 LINC01387J3KSC0 135 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 IRS4O14654 1257 aaPredicted RBP5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 PPFIA3O75145 1194 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 CYP11A1P05108 521 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 MYCLP1P12525 358 aaPredicted RBP5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 LIG1P18858 919 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 L1CAMP32004 1257 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 C19orf57Q0VDD7 668 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 PABPC4Q13310 644 aaKnown RBP eCLIP5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 FOXR1Q6PIV2 292 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 IL22RA1Q8N6P7 574 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 NUDT8Q8WV74 236 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 KISS1RQ969F8 398 aaPredicted RBP5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 EXOC2Q96KP1 924 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 SLC26A8Q96RN1 970 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 EPN3Q9H201 632 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 HOMER2Q9NSB8 354 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 ZNF214Q9UL59 606 aaPredicted RBP5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 STARD13Q9Y3M8 1113 aa5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 ARID4BQ4LE39 1312 aaPredicted RBP5.91□□□□□ -1.46
RNU6-488P-201ENST00000515918 CDC14CA4D256 554 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 FAM177BA6PVY3 158 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 NRG2O14511 850 aaPredicted RBP5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 GFRA3O60609 400 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 RFPL3O75679 317 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 ADH6P28332 368 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 POLR2BP30876 1174 aaKnown RBP5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 GRK4P32298 578 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 STAT3P40763 770 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 PIP4K2BP78356 416 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 SLC7A5Q01650 507 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 RING1Q06587 406 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 MLECQ14165 292 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 KIF4BQ2VIQ3 1234 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 GNPTABQ3T906 1256 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 C12orf40Q86WS4 652 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 DDX42Q86XP3 938 aaKnown RBP eCLIP5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 CERS3Q8IU89 383 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 FMNL3Q8IVF7 1028 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 RAVER1Q8IY67 606 aaKnown RBP5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 LRRC47Q8N1G4 583 aaKnown RBP5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 CACTIN-AS1Q8N1I8 211 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 NANOS1Q8WY41 292 aaKnown RBP5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 JDP2Q8WYK2 163 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 CLUHP3Q96NS8 147 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 CORO1BQ9BR76 489 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 SUSD2Q9UGT4 822 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 PCDHGC5Q9Y5F6 944 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 CSADQ9Y600 493 aa5.9□□□□□ -1.46
RNU6-488P-201ENST00000515918 ELOA3CA0A087WX78 387 aaPredicted RBP5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 A0A1W2PQU0 124 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 ELOA3DA6NLF2 546 aaPredicted RBP5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 RGS9O75916 674 aaPredicted RBP5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 RGS20O76081 388 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 RAPGEF3O95398 923 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 MAP4K4O95819 1239 aaPredicted RBP5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 CNGA1P29973 690 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 GAS6Q14393 721 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 ELOA3BQ3SY89 546 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 BRDTQ58F21 947 aaPredicted RBP5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 HSP90AB2PQ58FF8 381 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 ZC3H12AQ5D1E8 599 aaKnown RBP5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 ZC3H12BQ5HYM0 836 aaKnown RBP5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 FAM209AQ5JX71 171 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 YOD1Q5VVQ6 348 aaPredicted RBP5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 C20orf204Q6ZNR8 217 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 SV2AQ7L0J3 742 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 RNF180Q86T96 592 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 UBR7Q8N806 425 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 ELOA3Q8NG57 546 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 CHAC2Q8WUX2 184 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 WNT8BQ93098 351 aa5.89□□□□□ -1.47
RNU6-488P-201ENST00000515918 ELMO3Q96BJ8 720 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms