RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 SMC5Q8IY18 1101 aa23.42■■□□□ 1.34
LMNA-225ENST00000515824 TNS4Q8IZW8 715 aa23.42■■□□□ 1.34
LMNA-225ENST00000515824 OTUD7AQ8TE49 926 aaPredicted RBP23.42■■□□□ 1.34
LMNA-225ENST00000515824 TRIM34Q9BYJ4 488 aa23.42■■□□□ 1.34
LMNA-225ENST00000515824 SAP30BPQ9UHR5 308 aaKnown RBP23.42■■□□□ 1.34
LMNA-225ENST00000515824 IGF2BP3O00425 579 aaKnown RBP eCLIP23.41■■□□□ 1.34
LMNA-225ENST00000515824 IGHDP01880 384 aa23.41■■□□□ 1.34
LMNA-225ENST00000515824 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
LMNA-225ENST00000515824 CRACR2BQ8N4Y2 399 aaPredicted RBP23.41■■□□□ 1.34
LMNA-225ENST00000515824 KBTBD3Q8NAB2 608 aa23.41■■□□□ 1.34
LMNA-225ENST00000515824 CFHR5Q9BXR6 569 aa23.41■■□□□ 1.34
LMNA-225ENST00000515824 FAM196BA6NMK8 535 aa23.4■■□□□ 1.34
LMNA-225ENST00000515824 PI4K2BQ8TCG2 481 aa23.4■■□□□ 1.34
LMNA-225ENST00000515824 BRI3BPQ8WY22 251 aa23.4■■□□□ 1.34
LMNA-225ENST00000515824 PTPN18Q99952 460 aa23.4■■□□□ 1.34
LMNA-225ENST00000515824 ZHX2Q9Y6X8 837 aa23.4■■□□□ 1.34
LMNA-225ENST00000515824 LRRFIP1Q32MZ4 808 aaKnown RBP23.39■■□□□ 1.33
LMNA-225ENST00000515824 SLFNL1Q499Z3 407 aa23.39■■□□□ 1.33
LMNA-225ENST00000515824 B4GALNT3Q6L9W6 998 aa23.39■■□□□ 1.33
LMNA-225ENST00000515824 TTC6Q86TZ1 520 aa23.39■■□□□ 1.33
LMNA-225ENST00000515824 METTL16Q86W50 562 aaKnown RBP23.39■■□□□ 1.33
LMNA-225ENST00000515824 ARMT1Q9H993 441 aa23.39■■□□□ 1.33
LMNA-225ENST00000515824 CXCL11O14625 94 aa23.38■■□□□ 1.33
LMNA-225ENST00000515824 PTPRAP18433 802 aa23.38■■□□□ 1.33
LMNA-225ENST00000515824 LCORLQ8N3X6 602 aa23.38■■□□□ 1.33
LMNA-225ENST00000515824 KCNH4Q9UQ05 1017 aa23.38■■□□□ 1.33
LMNA-225ENST00000515824 SALL3Q9BXA9 1300 aa23.37■■□□□ 1.33
LMNA-225ENST00000515824 MBD4O95243 580 aa23.37■■□□□ 1.33
LMNA-225ENST00000515824 ZFYP08048 801 aaPredicted RBP23.37■■□□□ 1.33
LMNA-225ENST00000515824 CAP2P40123 477 aa23.37■■□□□ 1.33
LMNA-225ENST00000515824 SLC4A8Q2Y0W8 1093 aa23.37■■□□□ 1.33
LMNA-225ENST00000515824 NOM1Q5C9Z4 860 aaKnown RBP23.37■■□□□ 1.33
LMNA-225ENST00000515824 LNPKQ9C0E8 428 aa23.37■■□□□ 1.33
LMNA-225ENST00000515824 GPR25O00155 361 aa23.36■■□□□ 1.33
LMNA-225ENST00000515824 CHGBP05060 677 aa23.36■■□□□ 1.33
LMNA-225ENST00000515824 POLR3DP05423 398 aaPredicted RBP23.36■■□□□ 1.33
LMNA-225ENST00000515824 SDR42E1Q8WUS8 393 aa23.36■■□□□ 1.33
LMNA-225ENST00000515824 STAP2Q9UGK3 403 aa23.36■■□□□ 1.33
LMNA-225ENST00000515824 RNF113AO15541 343 aaKnown RBP23.35■■□□□ 1.33
LMNA-225ENST00000515824 PDE1AP54750 535 aa23.35■■□□□ 1.33
LMNA-225ENST00000515824 CHD1LQ86WJ1 897 aa23.35■■□□□ 1.33
LMNA-225ENST00000515824 PUS7LQ9H0K6 701 aaKnown RBP23.35■■□□□ 1.33
LMNA-225ENST00000515824 EHD4Q9H223 541 aa23.35■■□□□ 1.33
LMNA-225ENST00000515824 DCP1AQ9NPI6 582 aaPredicted RBP23.35■■□□□ 1.33
LMNA-225ENST00000515824 MCM9Q9NXL9 1143 aa23.35■■□□□ 1.33
LMNA-225ENST00000515824 SERPINB13Q9UIV8 391 aa23.35■■□□□ 1.33
LMNA-225ENST00000515824 AFG3L2Q9Y4W6 797 aa23.35■■□□□ 1.33
LMNA-225ENST00000515824 NUCB1Q02818 461 aa23.34■■□□□ 1.33
LMNA-225ENST00000515824 RRP1BQ14684 758 aaKnown RBP23.34■■□□□ 1.33
LMNA-225ENST00000515824 FAM43AQ8N2R8 423 aa23.34■■□□□ 1.33
LMNA-225ENST00000515824 ZNF296Q8WUU4 475 aaPredicted RBP23.34■■□□□ 1.33
LMNA-225ENST00000515824 DDRGK1Q96HY6 314 aa23.34■■□□□ 1.33
LMNA-225ENST00000515824 TBC1D2Q9BYX2 928 aa23.34■■□□□ 1.33
LMNA-225ENST00000515824 R3HDMLQ9H3Y0 253 aa23.34■■□□□ 1.33
LMNA-225ENST00000515824 ZFYVE28Q9HCC9 887 aa23.34■■□□□ 1.33
LMNA-225ENST00000515824 ZCCHC17Q9NP64 241 aaKnown RBP23.34■■□□□ 1.33
LMNA-225ENST00000515824 ATP8A2Q9NTI2 1148 aa23.34■■□□□ 1.33
LMNA-225ENST00000515824 BTBD19C9JJ37 291 aa23.33■■□□□ 1.33
LMNA-225ENST00000515824 CRHR2Q13324 411 aa23.33■■□□□ 1.33
LMNA-225ENST00000515824 TAF1CQ15572 869 aaPredicted RBP23.33■■□□□ 1.33
LMNA-225ENST00000515824 FASTKD5Q7L8L6 764 aaKnown RBP23.33■■□□□ 1.33
LMNA-225ENST00000515824 APPBP2Q92624 585 aa23.33■■□□□ 1.33
LMNA-225ENST00000515824 FSD1Q9BTV5 496 aa23.33■■□□□ 1.33
LMNA-225ENST00000515824 DNAJC18Q9H819 358 aa23.33■■□□□ 1.33
LMNA-225ENST00000515824 GINM1Q9NU53 330 aa23.33■■□□□ 1.33
LMNA-225ENST00000515824 FOCADQ5VW36 1801 aa23.33■■□□□ 1.32
LMNA-225ENST00000515824 CASP8AP2Q9UKL3 1982 aa23.32■■□□□ 1.32
LMNA-225ENST00000515824 CDK5RAP2Q96SN8 1893 aa23.32■■□□□ 1.32
LMNA-225ENST00000515824 LAMB1P07942 1786 aa23.32■■□□□ 1.32
LMNA-225ENST00000515824 PRKAB2O43741 272 aa23.32■■□□□ 1.32
LMNA-225ENST00000515824 FKTNO75072 461 aa23.32■■□□□ 1.32
LMNA-225ENST00000515824 ASNSP08243 561 aa23.32■■□□□ 1.32
LMNA-225ENST00000515824 PLCD1P51178 756 aa23.32■■□□□ 1.32
LMNA-225ENST00000515824 SLC4A4Q9Y6R1 1079 aa23.32■■□□□ 1.32
LMNA-225ENST00000515824 USP17L5A8MUK1 530 aa23.31■■□□□ 1.32
LMNA-225ENST00000515824 ANKRD23Q86SG2 305 aa23.31■■□□□ 1.32
LMNA-225ENST00000515824 AMOTL1Q8IY63 956 aa23.31■■□□□ 1.32
LMNA-225ENST00000515824 EVI5LQ96CN4 794 aa23.31■■□□□ 1.32
LMNA-225ENST00000515824 AS3MTQ9HBK9 375 aa23.31■■□□□ 1.32
LMNA-225ENST00000515824 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.31■■□□□ 1.32
LMNA-225ENST00000515824 A0A0G2JLL6 359 aaPredicted RBP23.3■■□□□ 1.32
LMNA-225ENST00000515824 TRIM75PA6NK02 468 aa23.3■■□□□ 1.32
LMNA-225ENST00000515824 PRRT2Q7Z6L0 340 aaPredicted RBP23.3■■□□□ 1.32
LMNA-225ENST00000515824 CCDC84Q86UT8 332 aaPredicted RBP23.3■■□□□ 1.32
LMNA-225ENST00000515824 ZNF280CQ8ND82 737 aa23.3■■□□□ 1.32
LMNA-225ENST00000515824 OSBP2Q969R2 916 aa23.3■■□□□ 1.32
LMNA-225ENST00000515824 STRBPQ96SI9 672 aaKnown RBP23.3■■□□□ 1.32
LMNA-225ENST00000515824 SPP2Q13103 211 aa23.29■■□□□ 1.32
LMNA-225ENST00000515824 DGKZQ13574 1117 aa23.29■■□□□ 1.32
LMNA-225ENST00000515824 TATDN1Q6P1N9 297 aa23.29■■□□□ 1.32
LMNA-225ENST00000515824 MYH1P12882 1939 aa23.29■■□□□ 1.32
LMNA-225ENST00000515824 PDHXO00330 501 aa23.28■■□□□ 1.32
LMNA-225ENST00000515824 GDF11O95390 407 aa23.28■■□□□ 1.32
LMNA-225ENST00000515824 MOGSQ13724 837 aa23.28■■□□□ 1.32
LMNA-225ENST00000515824 CERKLQ49MI3 558 aaPredicted RBP23.28■■□□□ 1.32
LMNA-225ENST00000515824 IFFO2Q5TF58 517 aa23.28■■□□□ 1.32
LMNA-225ENST00000515824 GADL1Q6ZQY3 521 aa23.28■■□□□ 1.32
LMNA-225ENST00000515824 CTU1Q7Z7A3 348 aaKnown RBP23.28■■□□□ 1.32
LMNA-225ENST00000515824 TAOK2Q9UL54 1235 aa23.28■■□□□ 1.32
LMNA-225ENST00000515824 DOCK1Q14185 1865 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms