RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 KIF3AQ9Y496 699 aa10.69□□□□□ -0.7
NR1I3-234ENST00000515621 FOCADQ5VW36 1801 aa10.69□□□□□ -0.7
NR1I3-234ENST00000515621 CHD4Q14839 1912 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 FLT1P17948 1338 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 YDJCA8MPS7 323 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 USP17L21D6R901 530 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 NFKBIEO00221 500 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 PFKFB2O60825 505 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 PDCP20941 246 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 CRKP46108 304 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 ANTXR2P58335 489 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 FKBP1CQ5VVH2 108 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 CLEC17AQ6ZS10 378 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 Q6ZUG5 572 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
NR1I3-234ENST00000515621 BRF1Q92994 677 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 GTF3C6Q969F1 213 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 MFRPQ9BY79 579 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 HDAC9Q9UKV0 1011 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 JAG2Q9Y219 1238 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
NR1I3-234ENST00000515621 NEDD4P46934 1319 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 ERICH2A1L162 156 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 SH2B2O14492 632 aaPredicted RBP10.67□□□□□ -0.7
NR1I3-234ENST00000515621 CPA1P15085 419 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
NR1I3-234ENST00000515621 ME3Q16798 604 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
NR1I3-234ENST00000515621 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 IQCA1Q86XH1 822 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 KIF12Q96FN5 646 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 EHD4Q9H223 541 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 DHX36Q9H2U1 1008 aaKnown RBP10.67□□□□□ -0.7
NR1I3-234ENST00000515621 ZNF277Q9NRM2 450 aaPredicted RBP10.67□□□□□ -0.7
NR1I3-234ENST00000515621 TCP11L1Q9NUJ3 509 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 SWAP70Q9UH65 585 aa10.67□□□□□ -0.7
NR1I3-234ENST00000515621 SCN9AQ15858 1988 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 COL4A5P29400 1685 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 ATRNL1Q5VV63 1379 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 PLIN4Q96Q06 1357 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 KDM4AO75164 1064 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 ENTPD3O75355 529 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 RAB3GAP1Q15042 981 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 C16orf86Q6ZW13 317 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 IGDCC4Q8TDY8 1250 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 DPF2Q92785 391 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 UBAC1Q9BSL1 405 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 SLKQ9H2G2 1235 aaPredicted RBP10.66□□□□□ -0.7
NR1I3-234ENST00000515621 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 BCS1LQ9Y276 419 aa10.66□□□□□ -0.7
NR1I3-234ENST00000515621 WDR33Q9C0J8 1336 aaKnown RBP10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CCDC196A0A1B0GTZ2 297 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 B4E1Z4 1266 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 FZD9O00144 591 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 PSMD14O00487 310 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CDKL5O76039 1030 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CALM1P0DP23 149 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CALM2P0DP24 149 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CALM3P0DP25 149 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 PTMSP20962 102 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CTDSPL2Q05D32 466 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CIAPIN1Q6FI81 312 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CDC42EP5Q6NZY7 148 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CPLX2Q6PUV4 134 aaKnown RBP10.65□□□□□ -0.7
NR1I3-234ENST00000515621 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 MAP3K14Q99558 947 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 LY9Q9HBG7 655 aa10.65□□□□□ -0.7
NR1I3-234ENST00000515621 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-234ENST00000515621 CDK5RAP2Q96SN8 1893 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 IFIT3O14879 490 aaKnown RBP10.64□□□□□ -0.71
NR1I3-234ENST00000515621 LARGE1O95461 756 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 GABPAQ06546 454 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 WTAPQ15007 396 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 SEC23AQ15436 765 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 SYNE3Q6ZMZ3 975 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 CYB5R4Q7L1T6 521 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 METTL16Q86W50 562 aaKnown RBP10.64□□□□□ -0.71
NR1I3-234ENST00000515621 DGKHQ86XP1 1220 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 KIAA0825Q8IV33 1275 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 SMARCC2Q8TAQ2 1214 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 ANKS1AQ92625 1134 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-234ENST00000515621 USP40Q9NVE5 1235 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 TMOD2Q9NZR1 351 aa10.64□□□□□ -0.71
NR1I3-234ENST00000515621 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms