RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 FKBP1CQ5VVH2 108 aa11.1□□□□□ -0.63
TPM3-222ENST00000515609 CLEC17AQ6ZS10 378 aa11.1□□□□□ -0.63
TPM3-222ENST00000515609 KIAA0825Q8IV33 1275 aa11.1□□□□□ -0.63
TPM3-222ENST00000515609 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
TPM3-222ENST00000515609 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
TPM3-222ENST00000515609 IDI2Q9BXS1 227 aa11.1□□□□□ -0.63
TPM3-222ENST00000515609 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
TPM3-222ENST00000515609 NEDD4P46934 1319 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 STX6O43752 255 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 ENTPD3O75355 529 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 TSPY3P0CV98 308 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 TSPY8P0CW00 308 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 GJB2P29033 226 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 KIF5BP33176 963 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 METAP2P50579 478 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM3-222ENST00000515609 IFIT1BQ5T764 474 aaKnown RBP11.09□□□□□ -0.63
TPM3-222ENST00000515609 LARP1BQ659C4 914 aaKnown RBP11.09□□□□□ -0.63
TPM3-222ENST00000515609 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 MAPKAPK5Q8IW41 473 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 TRIM22Q8IYM9 498 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 MTMR14Q8NCE2 650 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 IGDCC4Q8TDY8 1250 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 CCDC17Q96LX7 622 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 EHD4Q9H223 541 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 TCP11L1Q9NUJ3 509 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
TPM3-222ENST00000515609 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
TPM3-222ENST00000515609 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM3-222ENST00000515609 CHD4Q14839 1912 aa11.09□□□□□ -0.63
TPM3-222ENST00000515609 H3BQV1 296 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 DDAH1O94760 285 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 TNNI2P48788 182 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 GNAQP50148 359 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 SCNN1DP51172 638 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 ANTXR2P58335 489 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 STK3Q13188 491 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 TNFAIP1Q13829 316 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 GRIK5Q16478 980 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 SKOR2Q2VWA4 1001 aaPredicted RBP11.08□□□□□ -0.64
TPM3-222ENST00000515609 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 APOBEC3HQ6NTF7 200 aaKnown RBP11.08□□□□□ -0.64
TPM3-222ENST00000515609 CDC42EP5Q6NZY7 148 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 APOA5Q6Q788 366 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 C16orf86Q6ZW13 317 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 CYB5R4Q7L1T6 521 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 FOXP4Q8IVH2 680 aaPredicted RBP11.08□□□□□ -0.64
TPM3-222ENST00000515609 DPF2Q92785 391 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 MAP3K14Q99558 947 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 LRRC2Q9BYS8 371 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 LY9Q9HBG7 655 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 PI4KBQ9UBF8 816 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 TNKSO95271 1327 aa11.08□□□□□ -0.64
TPM3-222ENST00000515609 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
TPM3-222ENST00000515609 GOLGA8AA7E2F4 631 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 PSMD14O00487 310 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 RAD17O75943 681 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 BRD1O95696 1058 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 XBP1P17861 261 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 LMNB1P20700 586 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
TPM3-222ENST00000515609 TRIM29Q14134 588 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 CFAP100Q494V2 611 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 CHST3Q7LGC8 479 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
TPM3-222ENST00000515609 NECAB1Q8N987 351 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
TPM3-222ENST00000515609 SMARCC2Q8TAQ2 1214 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 HOOK2Q96ED9 719 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 OSBPL5Q9H0X9 879 aaPredicted RBP11.07□□□□□ -0.64
TPM3-222ENST00000515609 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
TPM3-222ENST00000515609 KAT14Q9H8E8 782 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 LAMB1P07942 1786 aa11.07□□□□□ -0.64
TPM3-222ENST00000515609 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 NID2Q14112 1375 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 YDJCA8MPS7 323 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 WDHD1O75717 1129 aaPredicted RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 ZSCAN22P10073 491 aaPredicted RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 NCLP19338 710 aaKnown RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 SYT1P21579 422 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 TFAP4Q01664 338 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 CXCL9Q07325 125 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 SCRN1Q12765 414 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 PICALMQ13492 652 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 NFKBIBQ15653 356 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 RTN1Q16799 776 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 ATL3Q6DD88 541 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 ZSCAN29Q8IWY8 852 aaPredicted RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 TNPO1Q92973 898 aaKnown RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 GMLQ99445 158 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 LZTS2Q9BRK4 669 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 SAP30BPQ9UHR5 308 aaKnown RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 HERC5Q9UII4 1024 aaKnown RBP11.06□□□□□ -0.64
TPM3-222ENST00000515609 PSME4Q14997 1843 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 FER1L6Q2WGJ9 1857 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 NAV1Q8NEY1 1877 aa11.06□□□□□ -0.64
TPM3-222ENST00000515609 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms