RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ADD1P35611 737 aaKnown RBP10.75□□□□□ -0.69
CPNE4-213ENST00000515418 CACNB3P54284 484 aa10.75□□□□□ -0.69
CPNE4-213ENST00000515418 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
CPNE4-213ENST00000515418 LARP1BQ659C4 914 aaKnown RBP10.75□□□□□ -0.69
CPNE4-213ENST00000515418 NSUN7Q8NE18 718 aaKnown RBP10.75□□□□□ -0.69
CPNE4-213ENST00000515418 DDX4Q9NQI0 724 aaKnown RBP10.75□□□□□ -0.69
CPNE4-213ENST00000515418 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.75□□□□□ -0.69
CPNE4-213ENST00000515418 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
CPNE4-213ENST00000515418 FLT1P17948 1338 aa10.75□□□□□ -0.69
CPNE4-213ENST00000515418 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
CPNE4-213ENST00000515418 MYH1P12882 1939 aa10.75□□□□□ -0.69
CPNE4-213ENST00000515418 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-213ENST00000515418 FOSBP53539 338 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 WTAPQ15007 396 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 APOA5Q6Q788 366 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 ZFPM1Q8IX07 1006 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 UBAC1Q9BSL1 405 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
CPNE4-213ENST00000515418 PTPDC1A2A3K4 754 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 VPS37CA5D8V6 355 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-213ENST00000515418 NFKBIEO00221 500 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 SLC3A2P08195 630 aaKnown RBP10.74□□□□□ -0.69
CPNE4-213ENST00000515418 SLURP2P0DP57 97 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 ZSCAN22P10073 491 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-213ENST00000515418 CDC27P30260 824 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 IARSP41252 1262 aaKnown RBP10.74□□□□□ -0.69
CPNE4-213ENST00000515418 LIFRP42702 1097 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 PDE4BQ07343 736 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 NFIAQ12857 509 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 SOGA3Q5TF21 947 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 ILDR2Q71H61 639 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 ENAHQ8N8S7 591 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-213ENST00000515418 ZSCAN10Q96SZ4 725 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-213ENST00000515418 MKNK2Q9HBH9 465 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 MTMR6Q9Y217 621 aa10.74□□□□□ -0.69
CPNE4-213ENST00000515418 WDR33Q9C0J8 1336 aaKnown RBP10.73□□□□□ -0.69
CPNE4-213ENST00000515418 ZNF646O15015 1829 aaPredicted RBP10.73□□□□□ -0.69
CPNE4-213ENST00000515418 ERICH2A1L162 156 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 CCDC69A6NI79 296 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 ZBTB43O43298 467 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 ORC4O43929 436 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 FDPSP14324 419 aaKnown RBP10.73□□□□□ -0.69
CPNE4-213ENST00000515418 FKBP1AP62942 108 aaKnown RBP10.73□□□□□ -0.69
CPNE4-213ENST00000515418 TFAP4Q01664 338 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 SART3Q15020 963 aaKnown RBP10.73□□□□□ -0.69
CPNE4-213ENST00000515418 SEC23AQ15436 765 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 MCTP1Q6DN14 999 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 SGMS1Q86VZ5 419 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 SMARCC2Q8TAQ2 1214 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 ZDHHC15Q96MV8 337 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 GBP4Q96PP9 640 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
CPNE4-213ENST00000515418 ZNRF3Q9ULT6 936 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 SLC12A7Q9Y666 1083 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 TNKSO95271 1327 aa10.73□□□□□ -0.69
CPNE4-213ENST00000515418 BAZ2BQ9UIF8 2168 aaKnown RBP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 NAV1Q8NEY1 1877 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 VIL1P09327 827 aaKnown RBP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 METAP2P50579 478 aaKnown RBP eCLIP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CXCL9Q07325 125 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 TCP10Q12799 353 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 RSBN1LQ6PCB5 846 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CERS3Q8IU89 383 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 AMOTL1Q8IY63 956 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 NIM1KQ8IY84 436 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CHMP4CQ96CF2 233 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 PRMT6Q96LA8 375 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 LLPHQ9BRT6 129 aaKnown RBP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 MRIQ9BWK5 157 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 TAOK3Q9H2K8 898 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 TDRD3Q9H7E2 651 aaKnown RBP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 LAMB1P07942 1786 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 TSPY2A6NKD2 308 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CPLX1O14810 134 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 PCP11498 1178 aaKnown RBP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CDK8P49336 464 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 PRELPP51888 382 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 RASSF7Q02833 373 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CFAP100Q494V2 611 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CLEC17AQ6ZS10 378 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CDC37L1Q7L3B6 337 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 IQCA1Q86XH1 822 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CMTR1Q8N1G2 835 aaKnown RBP10.72□□□□□ -0.69
CPNE4-213ENST00000515418 CCDC82Q8N4S0 544 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 FAM184AQ8NB25 1140 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 NUP133Q8WUM0 1156 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 SPON1Q9HCB6 807 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 IL17RBQ9NRM6 502 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 FER1L6Q2WGJ9 1857 aa10.72□□□□□ -0.69
CPNE4-213ENST00000515418 UBE2Q2LH0YL09 131 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 F13A1P00488 732 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 GUCY1B3Q02153 619 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 FAM173BQ6P4H8 233 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 SYNE3Q6ZMZ3 975 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 ZNF444Q8N0Y2 327 aaPredicted RBP10.71□□□□□ -0.69
CPNE4-213ENST00000515418 TMTC2Q8N394 836 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 PHKBQ93100 1093 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms