RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
SNF8-214ENST00000515174 C6orf229H3BNL8 230 aa11.94□□□□□ -0.5
SNF8-214ENST00000515174 IFIT3O14879 490 aaKnown RBP11.94□□□□□ -0.5
SNF8-214ENST00000515174 KDM4AO75164 1064 aa11.94□□□□□ -0.5
SNF8-214ENST00000515174 FDPSP14324 419 aaKnown RBP11.94□□□□□ -0.5
SNF8-214ENST00000515174 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
SNF8-214ENST00000515174 TMEM67Q5HYA8 995 aa11.94□□□□□ -0.5
SNF8-214ENST00000515174 PODNQ7Z5L7 613 aa11.94□□□□□ -0.5
SNF8-214ENST00000515174 USP48Q86UV5 1035 aa11.94□□□□□ -0.5
SNF8-214ENST00000515174 SDR42E1Q8WUS8 393 aa11.94□□□□□ -0.5
SNF8-214ENST00000515174 ZC3H12CQ9C0D7 883 aaKnown RBP11.94□□□□□ -0.5
SNF8-214ENST00000515174 SCAND2PQ9GZW5 306 aaPredicted RBP11.94□□□□□ -0.5
SNF8-214ENST00000515174 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
SNF8-214ENST00000515174 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
SNF8-214ENST00000515174 MROH7-TTC4A0A0A0MT08 1334 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 CCDC196A0A1B0GTZ2 297 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 ERICH2A1L162 156 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
SNF8-214ENST00000515174 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 USP17L21D6R901 530 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 ZBTB43O43298 467 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 C21orf2O43822 256 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 ZNF445P59923 1031 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 UBE2HP62256 183 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 CCT2P78371 535 aaKnown RBP11.93□□□□□ -0.5
SNF8-214ENST00000515174 KRT85P78386 507 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 RESTQ13127 1097 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 SEC23AQ15436 765 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 CCDC178Q5BJE1 867 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 L1TD1Q5T7N2 865 aaKnown RBP11.93□□□□□ -0.5
SNF8-214ENST00000515174 C12orf60Q5U649 245 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 CHADLQ6NUI6 762 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 DPP8Q6V1X1 898 aaPredicted RBP11.93□□□□□ -0.5
SNF8-214ENST00000515174 SYNE3Q6ZMZ3 975 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 GPT2Q8TD30 523 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 C7orf43Q8WVR3 580 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 ANKS1AQ92625 1134 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 NOL10Q9BSC4 688 aaKnown RBP11.93□□□□□ -0.5
SNF8-214ENST00000515174 AATFQ9NY61 560 aaKnown RBP eCLIP11.93□□□□□ -0.58e-6■■■■□ 21.3
SNF8-214ENST00000515174 TAOK2Q9UL54 1235 aa11.93□□□□□ -0.5
SNF8-214ENST00000515174 DDX60LQ5H9U9 1706 aaKnown RBP11.93□□□□□ -0.5
SNF8-214ENST00000515174 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 BAZ2AQ9UIF9 1905 aaKnown RBP11.92□□□□□ -0.5
SNF8-214ENST00000515174 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 GOLGA8BA8MQT2 603 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 MINDY4BA8MYZ0 360 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 H3BQV1 296 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 NFKBIEO00221 500 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 CPLX1O14810 134 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 IFNAR1P17181 557 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNF8-214ENST00000515174 PDE4BQ07343 736 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 WTAPQ15007 396 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 NTRK3Q16288 839 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 CCDC93Q567U6 631 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 FOXD4L5Q5VV16 416 aaPredicted RBP11.92□□□□□ -0.5
SNF8-214ENST00000515174 CDC37L1Q7L3B6 337 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 FBXO18Q8NFZ0 1043 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 NKX2-3Q8TAU0 364 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 FOXD4L4Q8WXT5 416 aaPredicted RBP11.92□□□□□ -0.5
SNF8-214ENST00000515174 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
SNF8-214ENST00000515174 FAM217BQ9NTX9 383 aaPredicted RBP11.92□□□□□ -0.5
SNF8-214ENST00000515174 CFAP45Q9UL16 551 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 SLC12A7Q9Y666 1083 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 ROBO3Q96MS0 1386 aa11.92□□□□□ -0.5
SNF8-214ENST00000515174 POTECB2RU33 542 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 FOXN1O15353 648 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 CALM1P0DP23 149 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 CALM2P0DP24 149 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 CALM3P0DP25 149 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 HDLBPQ00341 1268 aaKnown RBP11.91□□□□□ -0.5
SNF8-214ENST00000515174 DNM1Q05193 864 aaKnown RBP11.91□□□□□ -0.5
SNF8-214ENST00000515174 MFSD14BQ5SR56 506 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 IQCA1Q86XH1 822 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 NCOA5Q9HCD5 579 aaKnown RBP11.91□□□□□ -0.5
SNF8-214ENST00000515174 INCENPQ9NQS7 918 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 TCP11L1Q9NUJ3 509 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
SNF8-214ENST00000515174 TCHHQ07283 1943 aa11.91□□□□□ -0.5
SNF8-214ENST00000515174 GOLGA6L3A6NEY3 463 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
SNF8-214ENST00000515174 CTCFP49711 727 aaPredicted RBP11.9□□□□□ -0.5
SNF8-214ENST00000515174 GRIK5Q16478 980 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 NFXL1Q6ZNB6 911 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 AMOTL1Q8IY63 956 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 SUPT20HQ8NEM7 779 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 WASF1Q92558 559 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 DDX11Q96FC9 970 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 ZSCAN10Q96SZ4 725 aaPredicted RBP11.9□□□□□ -0.5
SNF8-214ENST00000515174 MAP3K14Q99558 947 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 UBAC1Q9BSL1 405 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 ZNF287Q9HBT7 754 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 RCOR1Q9UKL0 485 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 JAG2Q9Y219 1238 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
SNF8-214ENST00000515174 GOLGA8AA7E2F4 631 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 CDC27P30260 824 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms