RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 SLC44A5Q8NCS7 719 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 NCOA7Q8NI08 942 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 HACL1Q9UJ83 578 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 CYP46A1Q9Y6A2 500 aa19.91■□□□□ 0.78
AP3S1-208ENST00000515066 GREB1LQ9C091 1923 aaPredicted RBP19.9■□□□□ 0.78
AP3S1-208ENST00000515066 B4E1Z4 1266 aa19.9■□□□□ 0.78
AP3S1-208ENST00000515066 C16orf86Q6ZW13 317 aa19.9■□□□□ 0.78
AP3S1-208ENST00000515066 FAM151AQ8WW52 585 aa19.9■□□□□ 0.78
AP3S1-208ENST00000515066 TCEANC2Q96MN5 208 aa19.9■□□□□ 0.78
AP3S1-208ENST00000515066 DHX36Q9H2U1 1008 aaKnown RBP19.9■□□□□ 0.78
AP3S1-208ENST00000515066 RNF41Q9H4P4 317 aaPredicted RBP19.9■□□□□ 0.78
AP3S1-208ENST00000515066 PGAP2Q9UHJ9 254 aa19.9■□□□□ 0.78
AP3S1-208ENST00000515066 SCAF8Q9UPN6 1271 aaKnown RBP19.9■□□□□ 0.78
AP3S1-208ENST00000515066 ORC4O43929 436 aa19.89■□□□□ 0.77
AP3S1-208ENST00000515066 PRDM1O75626 825 aa19.89■□□□□ 0.77
AP3S1-208ENST00000515066 PCP11498 1178 aaKnown RBP19.89■□□□□ 0.77
AP3S1-208ENST00000515066 ANTXR2P58335 489 aa19.89■□□□□ 0.77
AP3S1-208ENST00000515066 EXOSC10Q01780 885 aaKnown RBP19.89■□□□□ 0.77
AP3S1-208ENST00000515066 TTC6Q86TZ1 520 aa19.89■□□□□ 0.77
AP3S1-208ENST00000515066 CDAN1Q8IWY9 1227 aa19.89■□□□□ 0.77
AP3S1-208ENST00000515066 TMEM39BQ9GZU3 492 aa19.89■□□□□ 0.77
AP3S1-208ENST00000515066 CNNM2Q9H8M5 875 aa19.89■□□□□ 0.77
AP3S1-208ENST00000515066 HMGB1P09429 215 aaKnown RBP19.88■□□□□ 0.77
AP3S1-208ENST00000515066 SLURP2P0DP57 97 aa19.88■□□□□ 0.77
AP3S1-208ENST00000515066 ANP32AP39687 249 aaKnown RBP19.88■□□□□ 0.77
AP3S1-208ENST00000515066 ANGEL2Q5VTE6 544 aaKnown RBP19.88■□□□□ 0.77
AP3S1-208ENST00000515066 CYB5R4Q7L1T6 521 aa19.88■□□□□ 0.77
AP3S1-208ENST00000515066 DHX32Q7L7V1 743 aaKnown RBP19.88■□□□□ 0.77
AP3S1-208ENST00000515066 EHD4Q9H223 541 aa19.88■□□□□ 0.77
AP3S1-208ENST00000515066 DNAJC18Q9H819 358 aa19.88■□□□□ 0.77
AP3S1-208ENST00000515066 GGA3Q9NZ52 723 aa19.88■□□□□ 0.77
AP3S1-208ENST00000515066 DCAF8L1A6NGE4 600 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 SLC3A2P08195 630 aaKnown RBP19.87■□□□□ 0.77
AP3S1-208ENST00000515066 TRDNQ13061 729 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 CHST3Q7LGC8 479 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 RALYLQ86SE5 291 aaKnown RBP19.87■□□□□ 0.77
AP3S1-208ENST00000515066 METTL16Q86W50 562 aaKnown RBP19.87■□□□□ 0.77
AP3S1-208ENST00000515066 SERPINB13Q9UIV8 391 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 KDM4AO75164 1064 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 HLA-DOAP06340 250 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 EPHX2P34913 555 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 CDK8P49336 464 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 PDE4BQ07343 736 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 TNFAIP1Q13829 316 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 RASA3Q14644 834 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 RRP12Q5JTH9 1297 aaKnown RBP19.87■□□□□ 0.77
AP3S1-208ENST00000515066 ZSCAN29Q8IWY8 852 aaPredicted RBP19.87■□□□□ 0.77
AP3S1-208ENST00000515066 SNX21Q969T3 373 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 TEPSINQ96N21 525 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 KRT23Q9C075 422 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 ZSWIM5Q9P217 1185 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 PI4KBQ9UBF8 816 aa19.87■□□□□ 0.77
AP3S1-208ENST00000515066 CSRNP1Q96S65 589 aa19.86■□□□□ 0.77
AP3S1-208ENST00000515066 LRRC2Q9BYS8 371 aa19.86■□□□□ 0.77
AP3S1-208ENST00000515066 TAF1DQ9H5J8 278 aaPredicted RBP19.86■□□□□ 0.77
AP3S1-208ENST00000515066 TOMM22Q9NS69 142 aa19.86■□□□□ 0.77
AP3S1-208ENST00000515066 PDRG1Q9NUG6 133 aa19.86■□□□□ 0.77
AP3S1-208ENST00000515066 ST18O60284 1047 aa19.85■□□□□ 0.77
AP3S1-208ENST00000515066 RASA1P20936 1047 aa19.85■□□□□ 0.77
AP3S1-208ENST00000515066 MCM5P33992 734 aa19.85■□□□□ 0.77
AP3S1-208ENST00000515066 AK2P54819 239 aa19.85■□□□□ 0.77
AP3S1-208ENST00000515066 USP50Q70EL3 339 aaPredicted RBP19.85■□□□□ 0.77
AP3S1-208ENST00000515066 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
AP3S1-208ENST00000515066 WDR19Q8NEZ3 1342 aa19.85■□□□□ 0.77
AP3S1-208ENST00000515066 PITPNM2Q9BZ72 1349 aa19.85■□□□□ 0.77
AP3S1-208ENST00000515066 ATAD5Q96QE3 1844 aa19.85■□□□□ 0.77
AP3S1-208ENST00000515066 IQCA1LA6NCM1 817 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 PRC1O43663 620 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 SHMT1P34896 483 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 TNNI2P48788 182 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 TOB2Q14106 344 aaPredicted RBP19.84■□□□□ 0.77
AP3S1-208ENST00000515066 APOBEC3FQ8IUX4 373 aaKnown RBP19.84■□□□□ 0.77
AP3S1-208ENST00000515066 IL27Q8NEV9 243 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 ESR2Q92731 530 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 TBC1D2Q9BYX2 928 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 DEFB129Q9H1M3 183 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 ALDH8A1Q9H2A2 487 aaPredicted RBP19.84■□□□□ 0.77
AP3S1-208ENST00000515066 FAM196BA6NMK8 535 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 FBXL16Q8N461 479 aa19.84■□□□□ 0.77
AP3S1-208ENST00000515066 GPHNQ9NQX3 736 aaPredicted RBP19.84■□□□□ 0.77
AP3S1-208ENST00000515066 RANBP6O60518 1105 aaKnown RBP19.83■□□□□ 0.76
AP3S1-208ENST00000515066 Q6ZUG5 572 aa19.83■□□□□ 0.76
AP3S1-208ENST00000515066 MKNK2Q9HBH9 465 aa19.83■□□□□ 0.76
AP3S1-208ENST00000515066 SWAP70Q9UH65 585 aa19.83■□□□□ 0.76
AP3S1-208ENST00000515066 MYH4Q9Y623 1939 aa19.82■□□□□ 0.76
AP3S1-208ENST00000515066 FAM47AQ5JRC9 791 aa19.82■□□□□ 0.76
AP3S1-208ENST00000515066 FOXP4Q8IVH2 680 aaPredicted RBP19.82■□□□□ 0.76
AP3S1-208ENST00000515066 IGDCC4Q8TDY8 1250 aa19.82■□□□□ 0.76
AP3S1-208ENST00000515066 ZNF287Q9HBT7 754 aa19.82■□□□□ 0.76
AP3S1-208ENST00000515066 MAP3K10Q02779 954 aa19.81■□□□□ 0.76
AP3S1-208ENST00000515066 LARP6Q9BRS8 491 aaKnown RBP19.81■□□□□ 0.76
AP3S1-208ENST00000515066 TAOK2Q9UL54 1235 aa19.81■□□□□ 0.76
AP3S1-208ENST00000515066 PLIN4Q96Q06 1357 aa19.81■□□□□ 0.76
AP3S1-208ENST00000515066 SSC5DA1L4H1 1573 aa19.81■□□□□ 0.76
AP3S1-208ENST00000515066 NT5C2P49902 561 aa19.81■□□□□ 0.76
AP3S1-208ENST00000515066 TATDN1Q6P1N9 297 aa19.81■□□□□ 0.76
AP3S1-208ENST00000515066 CRACR2BQ8N4Y2 399 aaPredicted RBP19.81■□□□□ 0.76
AP3S1-208ENST00000515066 ZC3H15Q8WU90 426 aaKnown RBP19.81■□□□□ 0.76
AP3S1-208ENST00000515066 ZKSCAN3Q9BRR0 538 aa19.81■□□□□ 0.76
AP3S1-208ENST00000515066 HERC5Q9UII4 1024 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms