RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CSRNP2Q9H175 543 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 CEP104O60308 925 aa14.83□□□□□ -0.03
TCOF1-214ENST00000515035 POLD1P28340 1107 aa14.83□□□□□ -0.03
TCOF1-214ENST00000515035 MAGEA1P43355 309 aa14.83□□□□□ -0.03
TCOF1-214ENST00000515035 MTHFSDQ2M296 383 aaKnown RBP14.83□□□□□ -0.03
TCOF1-214ENST00000515035 CEP128Q6ZU80 1094 aa14.83□□□□□ -0.03
TCOF1-214ENST00000515035 SIRT1Q96EB6 747 aa14.83□□□□□ -0.03
TCOF1-214ENST00000515035 PPANQ9NQ55 473 aaKnown RBP14.83□□□□□ -0.03
TCOF1-214ENST00000515035 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.83□□□□□ -0.03
TCOF1-214ENST00000515035 ARHGEF12Q9NZN5 1544 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 LIG3P49916 1009 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 ZNF174Q15697 407 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 ZNF365Q70YC5 407 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 PHLDB2Q86SQ0 1253 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-214ENST00000515035 BTG4Q9NY30 223 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 MAPK8IP1Q9UQF2 711 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 MAP3K5Q99683 1374 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 TXNDC9O14530 226 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 HOXC9P31274 260 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 TPTE2Q6XPS3 522 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 ZNF202O95125 648 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 TRAF1Q13077 416 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 CSGALNACT2Q8N6G5 542 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 TCHPQ9BT92 498 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 HDAC9Q9UKV0 1011 aa14.83□□□□□ -0.04
TCOF1-214ENST00000515035 NAA16Q6N069 864 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-214ENST00000515035 DZIP3Q86Y13 1208 aaKnown RBP14.82□□□□□ -0.04
TCOF1-214ENST00000515035 POLR2DO15514 142 aaKnown RBP14.82□□□□□ -0.04
TCOF1-214ENST00000515035 IRX5P78411 483 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-214ENST00000515035 PDE4DQ08499 809 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 MTMR3Q13615 1198 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 CFAP221Q4G0U5 840 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 NUP58Q9BVL2 599 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 XPO4Q9C0E2 1151 aaKnown RBP14.82□□□□□ -0.04
TCOF1-214ENST00000515035 INSRP06213 1382 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 GMNNO75496 209 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 CCDC14Q49A88 953 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 CCDC170Q8IYT3 715 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 NFATC2IPQ8NCF5 419 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 RPGRIP1Q96KN7 1286 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 NUF2Q9BZD4 464 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 TFCP2L1Q9NZI6 479 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 ABCA5Q8WWZ7 1642 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 GNA11P29992 359 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 DMTNQ08495 405 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 PSMD6Q15008 389 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 HHATQ5VTY9 493 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 SV2BQ7L1I2 683 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 BCAS4Q8TDM0 211 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 OTUD7AQ8TE49 926 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-214ENST00000515035 EYA1Q99502 592 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 LLPHQ9BRT6 129 aaKnown RBP14.82□□□□□ -0.04
TCOF1-214ENST00000515035 SNX14Q9Y5W7 946 aa14.82□□□□□ -0.04
TCOF1-214ENST00000515035 PAK1Q13153 545 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 GOLGA5Q8TBA6 731 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 GBP5Q96PP8 586 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 DDX41Q9UJV9 622 aaKnown RBP14.81□□□□□ -0.04
TCOF1-214ENST00000515035 TNFAIP3P21580 790 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 PAXIP1Q6ZW49 1069 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-214ENST00000515035 ZNF354CQ86Y25 554 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 STK38LQ9Y2H1 464 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 A0A1W2PP64 1363 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 PLCD1P51178 756 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 SMARCC2Q8TAQ2 1214 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 DDX21Q9NR30 783 aaKnown RBP eCLIP14.81□□□□□ -0.04
TCOF1-214ENST00000515035 TAB2Q9NYJ8 693 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 MAP3K19Q56UN5 1328 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 CUTAO60888 179 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 GNAT2P19087 354 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 LRMPQ12912 555 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 BEND3Q5T5X7 828 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 CCDC65Q8IXS2 484 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 RIPOR2Q9Y4F9 1068 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
TCOF1-214ENST00000515035 ZBTB7BO15156 539 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-214ENST00000515035 AP1ARQ63HQ0 302 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 RNF168Q8IYW5 571 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-214ENST00000515035 RRP36Q96EU6 259 aaKnown RBP14.8□□□□□ -0.04
TCOF1-214ENST00000515035 ASIC3Q9UHC3 531 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 PARP3Q9Y6F1 533 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-214ENST00000515035 SAR1BQ9Y6B6 198 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 DNMT1P26358 1616 aaKnown RBP14.8□□□□□ -0.04
TCOF1-214ENST00000515035 ZFYVE16Q7Z3T8 1539 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 HIP1RO75146 1068 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 BRD1O95696 1058 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 UBL4BQ8N7F7 174 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 MSANTD4Q8NCY6 345 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 EFCAB8A8MWE9 144 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 PEX19P40855 299 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 ETF1P62495 437 aaKnown RBP14.8□□□□□ -0.04
TCOF1-214ENST00000515035 PDE1CQ14123 709 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-214ENST00000515035 ASIC2Q16515 512 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 TSKSQ9UJT2 592 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 ARHGEF10O15013 1369 aa14.8□□□□□ -0.04
TCOF1-214ENST00000515035 SLC27A2O14975 620 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 RNF40O75150 1001 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 ANKRD20A3Q5VUR7 823 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms