RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 FLT1P17948 1338 aa17.94■□□□□ 0.46
SGCA-211ENST00000514934 PLXNB2O15031 1838 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 CXCL11O14625 94 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 SOX10P56693 466 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 JAG1P78504 1218 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 C17orf99Q6UX52 265 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 CCDC84Q86UT8 332 aaPredicted RBP17.93■□□□□ 0.46
SGCA-211ENST00000514934 ERO1AQ96HE7 468 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 PCDH10Q9P2E7 1040 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 PTPN22Q9Y2R2 807 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 TRIM17Q9Y577 477 aa17.93■□□□□ 0.46
SGCA-211ENST00000514934 DYNLL1P63167 89 aaKnown RBP17.92■□□□□ 0.46
SGCA-211ENST00000514934 ZSCAN29Q8IWY8 852 aaPredicted RBP17.92■□□□□ 0.46
SGCA-211ENST00000514934 KIF1BPQ96EK5 621 aa17.92■□□□□ 0.46
SGCA-211ENST00000514934 ARHGAP39Q9C0H5 1083 aa17.92■□□□□ 0.46
SGCA-211ENST00000514934 ZFYVE28Q9HCC9 887 aa17.92■□□□□ 0.46
SGCA-211ENST00000514934 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
SGCA-211ENST00000514934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.91■□□□□ 0.46
SGCA-211ENST00000514934 ZHX2Q9Y6X8 837 aa17.91■□□□□ 0.46
SGCA-211ENST00000514934 PDHXO00330 501 aa17.9■□□□□ 0.46
SGCA-211ENST00000514934 SHROOM1Q2M3G4 852 aaPredicted RBP17.9■□□□□ 0.46
SGCA-211ENST00000514934 TGFBRAP1Q8WUH2 860 aa17.9■□□□□ 0.46
SGCA-211ENST00000514934 ARMC5Q96C12 935 aa17.9■□□□□ 0.46
SGCA-211ENST00000514934 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
SGCA-211ENST00000514934 PARP14Q460N5 1801 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 TCRBV5S4A2TA0A5A2 114 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 RAB11FIP3O75154 756 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 BCRP11274 1271 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 PLCG2P16885 1265 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 CYP7A1P22680 504 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 LACTBP83111 547 aaPredicted RBP17.89■□□□□ 0.45
SGCA-211ENST00000514934 MAPKAPK5Q8IW41 473 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 MAGEB6Q8N7X4 407 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 EFCC1Q9HA90 598 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 RLFQ13129 1914 aa17.89■□□□□ 0.45
SGCA-211ENST00000514934 HMMRO75330 724 aa17.88■□□□□ 0.45
SGCA-211ENST00000514934 IDH1O75874 414 aaKnown RBP17.88■□□□□ 0.45
SGCA-211ENST00000514934 BAG3O95817 575 aa17.88■□□□□ 0.45
SGCA-211ENST00000514934 CAP2P40123 477 aa17.88■□□□□ 0.45
SGCA-211ENST00000514934 EDC3Q96F86 508 aaKnown RBP17.88■□□□□ 0.45
SGCA-211ENST00000514934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.88■□□□□ 0.45
SGCA-211ENST00000514934 PICK1Q9NRD5 415 aa17.88■□□□□ 0.45
SGCA-211ENST00000514934 PI4KBQ9UBF8 816 aa17.88■□□□□ 0.45
SGCA-211ENST00000514934 HERC5Q9UII4 1024 aaKnown RBP17.88■□□□□ 0.45
SGCA-211ENST00000514934 PALD1Q9ULE6 856 aa17.88■□□□□ 0.45
SGCA-211ENST00000514934 APBB1O00213 710 aa17.87■□□□□ 0.45
SGCA-211ENST00000514934 CYP2C8P10632 490 aa17.87■□□□□ 0.45
SGCA-211ENST00000514934 TMED8Q6PL24 325 aaPredicted RBP17.87■□□□□ 0.45
SGCA-211ENST00000514934 CLASRPQ8N2M8 674 aaKnown RBP17.87■□□□□ 0.45
SGCA-211ENST00000514934 MIGA1Q8NAN2 632 aa17.87■□□□□ 0.45
SGCA-211ENST00000514934 DHX36Q9H2U1 1008 aaKnown RBP17.87■□□□□ 0.45
SGCA-211ENST00000514934 CPA4Q9UI42 421 aa17.87■□□□□ 0.45
SGCA-211ENST00000514934 SLC45A1Q9Y2W3 748 aa17.87■□□□□ 0.45
SGCA-211ENST00000514934 GREB1LQ9C091 1923 aaPredicted RBP17.87■□□□□ 0.45
SGCA-211ENST00000514934 PDE6AP16499 860 aa17.86■□□□□ 0.45
SGCA-211ENST00000514934 TRIM47Q96LD4 638 aa17.86■□□□□ 0.45
SGCA-211ENST00000514934 PTCH2Q9Y6C5 1203 aa17.86■□□□□ 0.45
SGCA-211ENST00000514934 CEP290O15078 2479 aa17.86■□□□□ 0.45
SGCA-211ENST00000514934 TRIM75PA6NK02 468 aa17.85■□□□□ 0.45
SGCA-211ENST00000514934 CHGBP05060 677 aa17.85■□□□□ 0.45
SGCA-211ENST00000514934 ATP5JP18859 108 aa17.85■□□□□ 0.45
SGCA-211ENST00000514934 EVX2Q03828 476 aa17.85■□□□□ 0.45
SGCA-211ENST00000514934 TREML2Q5T2D2 321 aa17.85■□□□□ 0.45
SGCA-211ENST00000514934 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
SGCA-211ENST00000514934 POTEFA5A3E0 1075 aa17.84■□□□□ 0.45
SGCA-211ENST00000514934 MAP3K12Q12852 859 aa17.84■□□□□ 0.45
SGCA-211ENST00000514934 SLFNL1Q499Z3 407 aa17.84■□□□□ 0.45
SGCA-211ENST00000514934 SH3D19Q5HYK7 790 aa17.84■□□□□ 0.45
SGCA-211ENST00000514934 FASTKD5Q7L8L6 764 aaKnown RBP17.84■□□□□ 0.45
SGCA-211ENST00000514934 ZNF333Q96JL9 665 aa17.84■□□□□ 0.45
SGCA-211ENST00000514934 NOL10Q9BSC4 688 aaKnown RBP17.84■□□□□ 0.45
SGCA-211ENST00000514934 SAP30BPQ9UHR5 308 aaKnown RBP17.84■□□□□ 0.45
SGCA-211ENST00000514934 PCDHB15Q9Y5E8 787 aa17.84■□□□□ 0.45
SGCA-211ENST00000514934 GOLIM4O00461 696 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 SMARCA5O60264 1052 aaPredicted RBP17.83■□□□□ 0.44
SGCA-211ENST00000514934 SPP2Q13103 211 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 TATDN1Q6P1N9 297 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.44
SGCA-211ENST00000514934 ZNF280CQ8ND82 737 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 PARK7Q99497 189 aaKnown RBP17.83■□□□□ 0.44
SGCA-211ENST00000514934 HAUS7Q99871 368 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 WDR18Q9BV38 432 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 EHD4Q9H223 541 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 DCTPP1Q9H773 170 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 AGTPBP1Q9UPW5 1226 aa17.83■□□□□ 0.44
SGCA-211ENST00000514934 ZNF532Q9HCE3 1301 aa17.82■□□□□ 0.44
SGCA-211ENST00000514934 A0A0G2JMZ2 1700 aa17.82■□□□□ 0.44
SGCA-211ENST00000514934 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
SGCA-211ENST00000514934 GABPAQ06546 454 aa17.82■□□□□ 0.44
SGCA-211ENST00000514934 CERS3Q8IU89 383 aa17.82■□□□□ 0.44
SGCA-211ENST00000514934 PROCA1Q8NCQ7 364 aaPredicted RBP17.82■□□□□ 0.44
SGCA-211ENST00000514934 USP17L5A8MUK1 530 aa17.81■□□□□ 0.44
SGCA-211ENST00000514934 TTF1Q15361 905 aaPredicted RBP17.81■□□□□ 0.44
SGCA-211ENST00000514934 SLC9C2Q5TAH2 1124 aa17.81■□□□□ 0.44
SGCA-211ENST00000514934 GADL1Q6ZQY3 521 aa17.81■□□□□ 0.44
SGCA-211ENST00000514934 TBC1D2Q9BYX2 928 aa17.81■□□□□ 0.44
SGCA-211ENST00000514934 LRRCC1Q9C099 1032 aa17.81■□□□□ 0.44
SGCA-211ENST00000514934 PAG1Q9NWQ8 432 aa17.81■□□□□ 0.44
SGCA-211ENST00000514934 ZBTB21Q9ULJ3 1066 aa17.81■□□□□ 0.44
SGCA-211ENST00000514934 GDF11O95390 407 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms