RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 FLT1P17948 1338 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 TBC1D12O60347 775 aa16.89■□□□□ 0.29
ITGA3-214ENST00000514834 CTNND1O60716 968 aaKnown RBP16.89■□□□□ 0.29
ITGA3-214ENST00000514834 PLCG2P16885 1265 aa16.89■□□□□ 0.29
ITGA3-214ENST00000514834 SHROOM1Q2M3G4 852 aaPredicted RBP16.89■□□□□ 0.29
ITGA3-214ENST00000514834 DNAJC18Q9H819 358 aa16.89■□□□□ 0.29
ITGA3-214ENST00000514834 ZSWIM8A7E2V4 1837 aa16.89■□□□□ 0.29
ITGA3-214ENST00000514834 PTPRFP10586 1907 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 PDE6AP16499 860 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 ATP5JP18859 108 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 MAP3K12Q12852 859 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 GPAT2Q6NUI2 795 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.88■□□□□ 0.29
ITGA3-214ENST00000514834 PICK1Q9NRD5 415 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 ATAD5Q96QE3 1844 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 MYH1P12882 1939 aa16.88■□□□□ 0.29
ITGA3-214ENST00000514834 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
ITGA3-214ENST00000514834 SP3Q02447 781 aa16.87■□□□□ 0.29
ITGA3-214ENST00000514834 SLC9C2Q5TAH2 1124 aa16.87■□□□□ 0.29
ITGA3-214ENST00000514834 OTOP1Q7RTM1 612 aa16.87■□□□□ 0.29
ITGA3-214ENST00000514834 RIOK1Q9BRS2 568 aaKnown RBP16.87■□□□□ 0.29
ITGA3-214ENST00000514834 ZFYVE28Q9HCC9 887 aa16.87■□□□□ 0.29
ITGA3-214ENST00000514834 HPS5Q9UPZ3 1129 aa16.87■□□□□ 0.29
ITGA3-214ENST00000514834 PDHXO00330 501 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 CXCL11O14625 94 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 IGSF3O75054 1194 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 EVX2Q03828 476 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 TTF1Q15361 905 aaPredicted RBP16.86■□□□□ 0.29
ITGA3-214ENST00000514834 TSHZ3Q63HK5 1081 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 HAUS7Q99871 368 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 PAG1Q9NWQ8 432 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 PI4KBQ9UBF8 816 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 TRIM17Q9Y577 477 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 ZNF532Q9HCE3 1301 aa16.86■□□□□ 0.29
ITGA3-214ENST00000514834 A0A0G2JLL6 359 aaPredicted RBP16.85■□□□□ 0.29
ITGA3-214ENST00000514834 TRIM75PA6NK02 468 aa16.85■□□□□ 0.29
ITGA3-214ENST00000514834 TLR2O60603 784 aa16.85■□□□□ 0.29
ITGA3-214ENST00000514834 CAP2P40123 477 aa16.85■□□□□ 0.29
ITGA3-214ENST00000514834 PRRT2Q7Z6L0 340 aaPredicted RBP16.85■□□□□ 0.29
ITGA3-214ENST00000514834 ANKRD23Q86SG2 305 aa16.85■□□□□ 0.29
ITGA3-214ENST00000514834 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
ITGA3-214ENST00000514834 ARHGAP39Q9C0H5 1083 aa16.85■□□□□ 0.29
ITGA3-214ENST00000514834 DHX36Q9H2U1 1008 aaKnown RBP16.85■□□□□ 0.29
ITGA3-214ENST00000514834 PCDH10Q9P2E7 1040 aa16.85■□□□□ 0.29
ITGA3-214ENST00000514834 SUPT16HQ9Y5B9 1047 aaKnown RBP16.85■□□□□ 0.29
ITGA3-214ENST00000514834 MAGEB6P1A0A0J9YX57 407 aa16.84■□□□□ 0.29
ITGA3-214ENST00000514834 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
ITGA3-214ENST00000514834 USP5P45974 858 aa16.84■□□□□ 0.29
ITGA3-214ENST00000514834 AAMPQ13685 434 aa16.84■□□□□ 0.29
ITGA3-214ENST00000514834 PKN2Q16513 984 aaKnown RBP16.84■□□□□ 0.29
ITGA3-214ENST00000514834 FBXO46Q6PJ61 603 aaPredicted RBP16.84■□□□□ 0.29
ITGA3-214ENST00000514834 GADL1Q6ZQY3 521 aa16.84■□□□□ 0.29
ITGA3-214ENST00000514834 ZCCHC17Q9NP64 241 aaKnown RBP16.84■□□□□ 0.29
ITGA3-214ENST00000514834 CPA4Q9UI42 421 aa16.84■□□□□ 0.29
ITGA3-214ENST00000514834 HERC5Q9UII4 1024 aaKnown RBP16.84■□□□□ 0.29
ITGA3-214ENST00000514834 ADGRA2Q96PE1 1338 aa16.84■□□□□ 0.29
ITGA3-214ENST00000514834 CYP2C8P10632 490 aa16.83■□□□□ 0.28
ITGA3-214ENST00000514834 CTGFP29279 349 aa16.83■□□□□ 0.28
ITGA3-214ENST00000514834 SPP2Q13103 211 aa16.83■□□□□ 0.28
ITGA3-214ENST00000514834 C17orf99Q6UX52 265 aa16.83■□□□□ 0.28
ITGA3-214ENST00000514834 FOXP4Q8IVH2 680 aaPredicted RBP16.83■□□□□ 0.28
ITGA3-214ENST00000514834 LCORLQ8N3X6 602 aa16.83■□□□□ 0.28
ITGA3-214ENST00000514834 OTUD7AQ8TE49 926 aaPredicted RBP16.83■□□□□ 0.28
ITGA3-214ENST00000514834 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
ITGA3-214ENST00000514834 CENPFP49454 3210 aa16.83■□□□□ 0.28
ITGA3-214ENST00000514834 DDX60LQ5H9U9 1706 aaKnown RBP16.82■□□□□ 0.28
ITGA3-214ENST00000514834 GDF11O95390 407 aa16.82■□□□□ 0.28
ITGA3-214ENST00000514834 ADD2P35612 726 aa16.82■□□□□ 0.28
ITGA3-214ENST00000514834 PLCD1P51178 756 aa16.82■□□□□ 0.28
ITGA3-214ENST00000514834 SOX10P56693 466 aa16.82■□□□□ 0.28
ITGA3-214ENST00000514834 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
ITGA3-214ENST00000514834 ARMT1Q9H993 441 aa16.82■□□□□ 0.28
ITGA3-214ENST00000514834 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
ITGA3-214ENST00000514834 ECHDC1Q9NTX5 307 aa16.82■□□□□ 0.28
ITGA3-214ENST00000514834 MYH7P12883 1935 aa16.82■□□□□ 0.28
ITGA3-214ENST00000514834 SMIM22K7EJ46 135 aa16.81■□□□□ 0.28
ITGA3-214ENST00000514834 PRKAB2O43741 272 aa16.81■□□□□ 0.28
ITGA3-214ENST00000514834 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
ITGA3-214ENST00000514834 SDR42E1Q8WUS8 393 aa16.81■□□□□ 0.28
ITGA3-214ENST00000514834 PTPN22Q9Y2R2 807 aa16.81■□□□□ 0.28
ITGA3-214ENST00000514834 GTF3C3Q9Y5Q9 886 aa16.81■□□□□ 0.28
ITGA3-214ENST00000514834 TNRC18O15417 2968 aaPredicted RBP16.81■□□□□ 0.28
ITGA3-214ENST00000514834 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
ITGA3-214ENST00000514834 USP17L5A8MUK1 530 aa16.8■□□□□ 0.28
ITGA3-214ENST00000514834 CYP2D6P10635 497 aa16.8■□□□□ 0.28
ITGA3-214ENST00000514834 TMED8Q6PL24 325 aaPredicted RBP16.8■□□□□ 0.28
ITGA3-214ENST00000514834 FASTKD5Q7L8L6 764 aaKnown RBP16.8■□□□□ 0.28
ITGA3-214ENST00000514834 ZNF280CQ8ND82 737 aa16.8■□□□□ 0.28
ITGA3-214ENST00000514834 MBD4O95243 580 aa16.79■□□□□ 0.28
ITGA3-214ENST00000514834 HLA-DOAP06340 250 aa16.79■□□□□ 0.28
ITGA3-214ENST00000514834 RGS19P49795 217 aa16.79■□□□□ 0.28
ITGA3-214ENST00000514834 HMGCS2P54868 508 aa16.79■□□□□ 0.28
ITGA3-214ENST00000514834 LACTBP83111 547 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-214ENST00000514834 CERS3Q8IU89 383 aa16.79■□□□□ 0.28
ITGA3-214ENST00000514834 CRNKL1Q9BZJ0 848 aaKnown RBP16.79■□□□□ 0.28
ITGA3-214ENST00000514834 LOC285556D6RIA3 1793 aa16.79■□□□□ 0.28
ITGA3-214ENST00000514834 BAZ2AQ9UIF9 1905 aaKnown RBP16.78■□□□□ 0.28
ITGA3-214ENST00000514834 BCRP11274 1271 aa16.78■□□□□ 0.28
ITGA3-214ENST00000514834 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms