RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RNF20Q5VTR2 975 aa14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 CDC37L1Q7L3B6 337 aa14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 FOXP4Q8IVH2 680 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 SULF1Q8IWU6 871 aa14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 HERC5Q9UII4 1024 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 GREB1LQ9C091 1923 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 DDTLA6NHG4 134 aaPredicted RBP14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 ZNF213O14771 459 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 POLR3DP05423 398 aaPredicted RBP14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 HLA-DOAP06340 250 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 CYP21A2P08686 494 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 TCP10Q12799 353 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 CREB3L3Q68CJ9 461 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 KRT26Q7Z3Y9 468 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 TMEM39BQ9GZU3 492 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 NBPF3Q9H094 633 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 UPF2Q9HAU5 1272 aaKnown RBP14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 SWAP70Q9UH65 585 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 SERPINB13Q9UIV8 391 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 PALD1Q9ULE6 856 aa14.24□□□□□ -0.13
PDLIM5-220ENST00000514830 ATAD5Q96QE3 1844 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 SLC27A2O14975 620 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 SLC3A2P08195 630 aaKnown RBP14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 MCCP23508 829 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 PLCD1P51178 756 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 C16orf86Q6ZW13 317 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 CSRNP1Q96S65 589 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 RNF41Q9H4P4 317 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 CREBZFQ9NS37 354 aa14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 SAP30BPQ9UHR5 308 aaKnown RBP14.23□□□□□ -0.13
PDLIM5-220ENST00000514830 SSC5DA1L4H1 1573 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 ORC4O43929 436 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 CYP2D6P10635 497 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 ZKSCAN1P17029 563 aaPredicted RBP14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 KRT32Q14532 448 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 SUPT20HL1Q3ZLR7 823 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 AKNAD1Q5T1N1 836 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 TATDN1Q6P1N9 297 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 ZSCAN29Q8IWY8 852 aaPredicted RBP14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 IL27Q8NEV9 243 aa14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDLIM5-220ENST00000514830 DOCK1Q14185 1865 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 CYP2D7A0A087X1C5 515 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 PDE4BQ07343 736 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 DCAF15Q66K64 600 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 TBC1D32Q96NH3 1257 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 C22orf23Q9BZE7 217 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 CNNM2Q9H8M5 875 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 OTOFQ9HC10 1997 aa14.21□□□□□ -0.13
PDLIM5-220ENST00000514830 ADM5C9JUS6 153 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 E7EWF7 191 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 ITGBL1O95965 494 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 NBPF12Q5TAG4 269 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 MFSD6Q6ZSS7 791 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 USP48Q86UV5 1035 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 TBC1D10CQ8IV04 446 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 RASEFQ8IZ41 740 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 CDCA5Q96FF9 252 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 TM6SF1Q9BZW5 370 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 DNAJC18Q9H819 358 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 ZNF112Q9UJU3 913 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 SNX14Q9Y5W7 946 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 PLIN4Q96Q06 1357 aa14.2□□□□□ -0.14
PDLIM5-220ENST00000514830 UNCXA6NJT0 531 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 SHMT1P34896 483 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 CDK8P49336 464 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 HAND2P61296 217 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 EVX2Q03828 476 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 CTDSPL2Q05D32 466 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 MAP3K11Q16584 847 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 MAP1SQ66K74 1059 aaPredicted RBP14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 CDAN1Q8IWY9 1227 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 CRACR2BQ8N4Y2 399 aaPredicted RBP14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 CCDC17Q96LX7 622 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 MTA3Q9BTC8 594 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 GLIS2Q9BZE0 524 aaPredicted RBP14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 KRT23Q9C075 422 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 GINM1Q9NU53 330 aa14.19□□□□□ -0.14
PDLIM5-220ENST00000514830 WDR19Q8NEZ3 1342 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 PHF20L1A8MW92 1017 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 SMIM22K7EJ46 135 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 HMGB1P09429 215 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 RASA1P20936 1047 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 NF2P35240 595 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 STOX1Q6ZVD7 989 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 ZNF341Q9BYN7 854 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 SCAF8Q9UPN6 1271 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 TACC3Q9Y6A5 838 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 TAF6LQ9Y6J9 622 aa14.18□□□□□ -0.14
PDLIM5-220ENST00000514830 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms