RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 APLFQ8IW19 511 aaPredicted RBP18.26■□□□□ 0.51
CDH6-205ENST00000514738 OXCT2Q9BYC2 517 aaPredicted RBP18.26■□□□□ 0.51
CDH6-205ENST00000514738 CARMIL1Q5VZK9 1371 aa18.26■□□□□ 0.51
CDH6-205ENST00000514738 LSM1O15116 133 aaKnown RBP18.25■□□□□ 0.51
CDH6-205ENST00000514738 MAP3K13O43283 966 aa18.25■□□□□ 0.51
CDH6-205ENST00000514738 HOXD11P31277 338 aaPredicted RBP18.25■□□□□ 0.51
CDH6-205ENST00000514738 HSPA4P34932 840 aa18.25■□□□□ 0.51
CDH6-205ENST00000514738 SOGA3Q5TF21 947 aa18.25■□□□□ 0.51
CDH6-205ENST00000514738 IRF2BPLQ9H1B7 796 aa18.25■□□□□ 0.51
CDH6-205ENST00000514738 NPTXRO95502 500 aa18.25■□□□□ 0.51
CDH6-205ENST00000514738 DYDC1Q8WWB3 177 aa18.25■□□□□ 0.51
CDH6-205ENST00000514738 CNKSR1Q969H4 720 aa18.25■□□□□ 0.51
CDH6-205ENST00000514738 FAM167BQ9BTA0 163 aa18.25■□□□□ 0.51
CDH6-205ENST00000514738 PALM3A6NDB9 673 aaPredicted RBP18.24■□□□□ 0.51
CDH6-205ENST00000514738 SDSP20132 328 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 AMPHP49418 695 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 BPIFB4P59827 614 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 PACS1Q6VY07 963 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 FCHSD1Q86WN1 690 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 PPP2R2CQ9Y2T4 447 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 WDR62O43379 1518 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 AGPSO00116 658 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 LGR5O75473 907 aa18.24■□□□□ 0.51
CDH6-205ENST00000514738 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
CDH6-205ENST00000514738 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.24■□□□□ 0.51
CDH6-205ENST00000514738 DZIP1Q86YF9 867 aaKnown RBP18.24■□□□□ 0.51
CDH6-205ENST00000514738 NOP53Q9NZM5 478 aaKnown RBP18.24■□□□□ 0.51
CDH6-205ENST00000514738 RRP7AQ9Y3A4 280 aaKnown RBP18.24■□□□□ 0.51
CDH6-205ENST00000514738 SPDYE5A6NIY4 337 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 DNM1LO00429 736 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 VDRP11473 427 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 PHEXP78562 749 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 C6orf89Q6UWU4 347 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 CACTIN-AS1Q8N1I8 211 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 LSM14AQ8ND56 463 aaKnown RBP18.23■□□□□ 0.51
CDH6-205ENST00000514738 USP33Q8TEY7 942 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 CCDC12Q8WUD4 166 aaPredicted RBP18.23■□□□□ 0.51
CDH6-205ENST00000514738 IWS1Q96ST2 819 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 MPHOSPH6Q99547 160 aaKnown RBP18.23■□□□□ 0.51
CDH6-205ENST00000514738 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
CDH6-205ENST00000514738 POLE2P56282 527 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 WDR93Q6P2C0 686 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 CCHCR1Q8TD31 782 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 TMCO1Q9UM00 188 aa18.23■□□□□ 0.51
CDH6-205ENST00000514738 DIAPH2O60879 1101 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 CLTAP09496 248 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 PSMC4P43686 418 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 ELF3P78545 371 aaPredicted RBP18.22■□□□□ 0.51
CDH6-205ENST00000514738 STX1AQ16623 288 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 FAAH2Q6GMR7 532 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 ZNF473Q8WTR7 871 aaKnown RBP18.22■□□□□ 0.51
CDH6-205ENST00000514738 COG1Q8WTW3 980 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 RHBDL2Q9NX52 303 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 N4BP3O15049 544 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 OXCT1P55809 520 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 SKOR1P84550 965 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 PDCLQ13371 301 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 CCDC70Q6NSX1 233 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
CDH6-205ENST00000514738 NR1I2O75469 434 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 TRIM21P19474 475 aaKnown RBP18.21■□□□□ 0.51
CDH6-205ENST00000514738 MCM3P25205 808 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 CCDC155Q8N6L0 562 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 TEX9Q8N6V9 391 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 BPIFA3Q9BQP9 254 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 XPO4Q9C0E2 1151 aaKnown RBP18.21■□□□□ 0.51
CDH6-205ENST00000514738 CDC23Q9UJX2 597 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 FBXO9Q9UK97 447 aaPredicted RBP18.21■□□□□ 0.51
CDH6-205ENST00000514738 PALD1Q9ULE6 856 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 NDUFB5O43674 189 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 TMCC1O94876 653 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 KRT85P78386 507 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 PI16Q6UXB8 463 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 FNBP4Q8N3X1 1017 aaPredicted RBP18.21■□□□□ 0.51
CDH6-205ENST00000514738 NDNQ99608 321 aa18.21■□□□□ 0.51
CDH6-205ENST00000514738 ARHGAP27Q6ZUM4 889 aa18.2■□□□□ 0.5
CDH6-205ENST00000514738 NACC2Q96BF6 587 aa18.2■□□□□ 0.5
CDH6-205ENST00000514738 L3MBTL3Q96JM7 780 aaPredicted RBP18.2■□□□□ 0.5
CDH6-205ENST00000514738 UPF3BQ9BZI7 483 aaKnown RBP18.2■□□□□ 0.5
CDH6-205ENST00000514738 ARHGEF10LQ9HCE6 1279 aa18.2■□□□□ 0.5
CDH6-205ENST00000514738 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
CDH6-205ENST00000514738 CTDP1Q9Y5B0 961 aaPredicted RBP18.2■□□□□ 0.5
CDH6-205ENST00000514738 PFDN1O60925 122 aa18.2■□□□□ 0.5
CDH6-205ENST00000514738 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
CDH6-205ENST00000514738 EPN3Q9H201 632 aa18.2■□□□□ 0.5
CDH6-205ENST00000514738 CROTQ9UKG9 612 aa18.2■□□□□ 0.5
CDH6-205ENST00000514738 HOXD12P35452 270 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 KRT72Q14CN4 511 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 MAP7D1Q3KQU3 841 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 ANKRD20A8PQ5CZ79 823 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 SSH1Q8WYL5 1049 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 OSBPL10Q9BXB5 764 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 EIF4E1BA6NMX2 242 aaKnown RBP18.19■□□□□ 0.5
CDH6-205ENST00000514738 KIF5BP33176 963 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 FBLN2P98095 1184 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 SPRED3Q2MJR0 410 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 SPECC1Q5M775 1068 aa18.19■□□□□ 0.5
CDH6-205ENST00000514738 MEX3CQ5U5Q3 659 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms