RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 RTCBQ9Y3I0 505 aaKnown RBP5.42□□□□□ -1.54
SEC24D-214ENST00000514561 A0A087WWV3 80 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 CCDC196A0A1B0GTZ2 297 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 RIMBP2O15034 1052 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 PUM3Q15397 648 aaKnown RBP5.42□□□□□ -1.54
SEC24D-214ENST00000514561 SWT1Q5T5J6 900 aaKnown RBP5.42□□□□□ -1.54
SEC24D-214ENST00000514561 SOGA3Q5TF21 947 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 ZNF622Q969S3 477 aaKnown RBP eCLIP5.42□□□□□ -1.544e-8■□□□□ 8.1
SEC24D-214ENST00000514561 CDK5RAP3Q96JB5 506 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 ZSCAN16Q9H4T2 348 aaPredicted RBP5.42□□□□□ -1.54
SEC24D-214ENST00000514561 ANO10Q9NW15 660 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 MCM9Q9NXL9 1143 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 PSD3Q9NYI0 1048 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 RSPH14Q9UHP6 348 aa5.42□□□□□ -1.54
SEC24D-214ENST00000514561 LOC102724428A0A0B4J2F2 783 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CCDC189A1A4V9 331 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 NBPF26B4DH59 902 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 IPO7O95373 1038 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 FGAP02671 866 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 AFMP43652 599 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SIK1P57059 783 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 KCNA1Q09470 495 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 IFIT1BQ5T764 474 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 NBPF14Q5TI25 921 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 NBPF10Q6P3W6 841 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CTR9Q6PD62 1173 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 TPTE2Q6XPS3 522 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SYT10Q6XYQ8 523 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CCDC186Q7Z3E2 898 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 NBPF15Q8N660 670 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SDR42E1Q8WUS8 393 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CPLX3Q8WVH0 158 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 WASF1Q92558 559 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 MAP4K1Q92918 833 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CCDC47Q96A33 483 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SPACA7Q96KW9 195 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 FTOQ9C0B1 505 aaKnown RBP eCLIP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 HELLSQ9NRZ9 838 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 ZNF215Q9UL58 517 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 MAGEB6P1A0A0J9YX57 407 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 PNMA6AP0CW24 399 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 PTGS1P23219 599 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 PAX3P23760 479 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 LMOD1P29536 600 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CASQ1P31415 396 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 ADD1P35611 737 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CCDC102BQ68D86 513 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 DPH6Q7L8W6 267 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 AOPEPQ8N6M6 819 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 ZBTB38Q8NAP3 1195 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 MNS1Q8NEH6 495 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 ESR2Q92731 530 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SMARCC1Q92922 1105 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 ERO1AQ96HE7 468 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 HAUS7Q99871 368 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 ZSWIM6Q9HCJ5 1215 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 AATFQ9NY61 560 aaKnown RBP eCLIP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 MTMR6Q9Y217 621 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 HEG1Q9ULI3 1381 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 AHDC1Q5TGY3 1603 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 MYO1CO00159 1063 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SPTLC2O15270 562 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 LIG1P18858 919 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SYKP43405 635 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CRKLP46109 303 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 GYS2P54840 703 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 BMS1Q14692 1282 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SRLQ86TD4 932 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 SUGP1Q8IWZ8 645 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 LRRN4CLQ8ND94 238 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 FAM200AQ8TCP9 573 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 MRPS27Q92552 414 aaKnown RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 TCEAL9Q9UHQ7 104 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 CTDP1Q9Y5B0 961 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 RGPD3A6NKT7 1758 aaPredicted RBP5.41□□□□□ -1.54
SEC24D-214ENST00000514561 RGPD4Q7Z3J3 1758 aa5.41□□□□□ -1.54
SEC24D-214ENST00000514561 USP27XA6NNY8 438 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 SFPQP23246 707 aaKnown RBP eCLIP5.4□□□□□ -1.54
SEC24D-214ENST00000514561 NAP1L1P55209 391 aaKnown RBP5.4□□□□□ -1.54
SEC24D-214ENST00000514561 LRMPQ12912 555 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 AMHR2Q16671 573 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 CCDC96Q2M329 555 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 GIGYF2Q6Y7W6 1299 aaKnown RBP5.4□□□□□ -1.54
SEC24D-214ENST00000514561 TMC6Q7Z403 805 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 TTC6Q86TZ1 520 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 CRACR2BQ8N4Y2 399 aaPredicted RBP5.4□□□□□ -1.54
SEC24D-214ENST00000514561 SPATA5Q8NB90 893 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 LEO1Q8WVC0 666 aaPredicted RBP5.4□□□□□ -1.54
SEC24D-214ENST00000514561 LPIN2Q92539 896 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 OSBP2Q969R2 916 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 RASSF4Q9H2L5 321 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 SAP30BPQ9UHR5 308 aaKnown RBP5.4□□□□□ -1.54
SEC24D-214ENST00000514561 MAP2P11137 1827 aaKnown RBP5.4□□□□□ -1.54
SEC24D-214ENST00000514561 MAP3K15Q6ZN16 1313 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 CCDC194A0A1B0GVG4 234 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 FANCGO15287 622 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 KRT18P05783 430 aaKnown RBP5.4□□□□□ -1.54
SEC24D-214ENST00000514561 TCF3P15923 654 aa5.4□□□□□ -1.54
SEC24D-214ENST00000514561 STX1AQ16623 288 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms