RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 CERS3Q8IU89 383 aa13.54□□□□□ -0.24
HTT-213ENST00000513806 LSG1Q9H089 658 aaKnown RBP13.54□□□□□ -0.24
HTT-213ENST00000513806 ANO2Q9NQ90 1003 aa13.54□□□□□ -0.24
HTT-213ENST00000513806 PHIPQ8WWQ0 1821 aa13.54□□□□□ -0.24
HTT-213ENST00000513806 RAD50Q92878 1312 aa13.54□□□□□ -0.24
HTT-213ENST00000513806 SEC24BO95487 1268 aa13.53□□□□□ -0.24
HTT-213ENST00000513806 INPP5BP32019 993 aa13.53□□□□□ -0.24
HTT-213ENST00000513806 SUPT20HL1Q3ZLR7 823 aa13.53□□□□□ -0.24
HTT-213ENST00000513806 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
HTT-213ENST00000513806 CRACR2BQ8N4Y2 399 aaPredicted RBP13.53□□□□□ -0.24
HTT-213ENST00000513806 NKX2-3Q8TAU0 364 aa13.53□□□□□ -0.24
HTT-213ENST00000513806 CLMNQ96JQ2 1002 aa13.53□□□□□ -0.24
HTT-213ENST00000513806 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■■■■ 46.7
HTT-213ENST00000513806 GBA2Q9HCG7 927 aaPredicted RBP13.53□□□□□ -0.24
HTT-213ENST00000513806 TAF6LQ9Y6J9 622 aa13.53□□□□□ -0.24
HTT-213ENST00000513806 PRDM1O75626 825 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 GDF11O95390 407 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 MFAP1P55081 439 aaKnown RBP13.52□□□□□ -0.25
HTT-213ENST00000513806 C1QTNF8P60827 252 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 JAG1P78504 1218 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 C8orf34Q49A92 452 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 ZKSCAN4Q969J2 545 aaPredicted RBP13.52□□□□□ -0.25
HTT-213ENST00000513806 DDRGK1Q96HY6 314 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 WRNIP1Q96S55 665 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 NACAP1Q9BZK3 213 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 NBPF3Q9H094 633 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 DHX36Q9H2U1 1008 aaKnown RBP13.52□□□□□ -0.25
HTT-213ENST00000513806 PI4KBQ9UBF8 816 aa13.52□□□□□ -0.25
HTT-213ENST00000513806 PHF20L1A8MW92 1017 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 SHMT1P34896 483 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 NF2P35240 595 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 APLP1P51693 650 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 PPARAQ07869 468 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 ALX1Q15699 326 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 SBK1Q52WX2 424 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 GIMAP6Q6P9H5 292 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 ZNF341Q9BYN7 854 aa13.51□□□□□ -0.25
HTT-213ENST00000513806 ARPP21Q9UBL0 812 aaPredicted RBP13.51□□□□□ -0.25
HTT-213ENST00000513806 RBM8AQ9Y5S9 174 aaKnown RBP13.51□□□□□ -0.25
HTT-213ENST00000513806 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 CDK8P49336 464 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 HUNKP57058 714 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 GABPAQ06546 454 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 MKRN3Q13064 507 aaKnown RBP13.5□□□□□ -0.25
HTT-213ENST00000513806 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.5□□□□□ -0.25
HTT-213ENST00000513806 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 TBC1D10CQ8IV04 446 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 C2orf69Q8N8R5 385 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.5□□□□□ -0.25
HTT-213ENST00000513806 KLRG1Q96E93 195 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 ELP3Q9H9T3 547 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 SERPINB13Q9UIV8 391 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 ABT1Q9ULW3 272 aaKnown RBP13.5□□□□□ -0.25
HTT-213ENST00000513806 MYH4Q9Y623 1939 aa13.5□□□□□ -0.25
HTT-213ENST00000513806 PTPRFP10586 1907 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 GREB1LQ9C091 1923 aaPredicted RBP13.49□□□□□ -0.25
HTT-213ENST00000513806 PPP1R12BO60237 982 aaPredicted RBP13.49□□□□□ -0.25
HTT-213ENST00000513806 AKR1B1P15121 316 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 GRM1Q13255 1194 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
HTT-213ENST00000513806 VGLL4Q14135 290 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 DCAF15Q66K64 600 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 C16orf86Q6ZW13 317 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 METTL16Q86W50 562 aaKnown RBP13.49□□□□□ -0.25
HTT-213ENST00000513806 CLEC10AQ8IUN9 316 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 AMOTL1Q8IY63 956 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 EHD4Q9H223 541 aa13.49□□□□□ -0.25
HTT-213ENST00000513806 NEDD4P46934 1319 aa13.48□□□□□ -0.25
HTT-213ENST00000513806 TBC1D12O60347 775 aa13.48□□□□□ -0.25
HTT-213ENST00000513806 CYP21A2P08686 494 aa13.48□□□□□ -0.25
HTT-213ENST00000513806 IREB2P48200 963 aaKnown RBP13.48□□□□□ -0.25
HTT-213ENST00000513806 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
HTT-213ENST00000513806 FAM47AQ5JRC9 791 aa13.48□□□□□ -0.25
HTT-213ENST00000513806 RRP12Q5JTH9 1297 aaKnown RBP13.48□□□□□ -0.25
HTT-213ENST00000513806 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
HTT-213ENST00000513806 SAPCD2Q86UD0 394 aa13.48□□□□□ -0.25
HTT-213ENST00000513806 FOXP4Q8IVH2 680 aaPredicted RBP13.48□□□□□ -0.25
HTT-213ENST00000513806 HERC5Q9UII4 1024 aaKnown RBP13.48□□□□□ -0.25
HTT-213ENST00000513806 ZNF112Q9UJU3 913 aa13.48□□□□□ -0.25
HTT-213ENST00000513806 TLL2Q9Y6L7 1015 aa13.48□□□□□ -0.25
HTT-213ENST00000513806 ROBO3Q96MS0 1386 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 ZMYM6O95789 1325 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
HTT-213ENST00000513806 ZNF213O14771 459 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 GJA5P36382 358 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 MAP3K11Q16584 847 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
HTT-213ENST00000513806 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 CYP4F22Q6NT55 531 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 TATDN1Q6P1N9 297 aa13.47□□□□□ -0.25
HTT-213ENST00000513806 STOX1Q6ZVD7 989 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms