RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 CHGBP05060 677 aa11.69□□□□□ -0.54
TPM3-221ENST00000513769 MCM5P33992 734 aa11.69□□□□□ -0.54
TPM3-221ENST00000513769 MMP14P50281 582 aa11.69□□□□□ -0.54
TPM3-221ENST00000513769 AK2P54819 239 aa11.69□□□□□ -0.54
TPM3-221ENST00000513769 RIOK1Q9BRS2 568 aaKnown RBP11.69□□□□□ -0.54
TPM3-221ENST00000513769 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
TPM3-221ENST00000513769 RNF41Q9H4P4 317 aaPredicted RBP11.69□□□□□ -0.54
TPM3-221ENST00000513769 GPBP1L1Q9HC44 474 aaPredicted RBP11.69□□□□□ -0.54
TPM3-221ENST00000513769 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
TPM3-221ENST00000513769 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
TPM3-221ENST00000513769 FOXP2O15409 715 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 OSBPP22059 807 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 HDLBPQ00341 1268 aaKnown RBP11.68□□□□□ -0.54
TPM3-221ENST00000513769 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 SBK1Q52WX2 424 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 TTLL5Q6EMB2 1281 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 ZNF274Q96GC6 653 aaPredicted RBP11.68□□□□□ -0.54
TPM3-221ENST00000513769 PSMD1Q99460 953 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 NOL10Q9BSC4 688 aaKnown RBP11.68□□□□□ -0.54
TPM3-221ENST00000513769 CRNKL1Q9BZJ0 848 aaKnown RBP11.68□□□□□ -0.54
TPM3-221ENST00000513769 KRT23Q9C075 422 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 NAPBQ9H115 298 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 PIM2Q9P1W9 311 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 IQSEC3Q9UPP2 1182 aaPredicted RBP11.68□□□□□ -0.54
TPM3-221ENST00000513769 CD2APQ9Y5K6 639 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 MYH7P12883 1935 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 COL4A1P02462 1669 aa11.68□□□□□ -0.54
TPM3-221ENST00000513769 DOCK2Q92608 1830 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 A0A1B0GUL6 1792 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 GPR75-ASB3A0A0A6YYF3 556 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 MBD4O95243 580 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 FGRP09769 529 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 KLRK1P26718 216 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 STRIP1Q5VSL9 837 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 CLEC17AQ6ZS10 378 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
TPM3-221ENST00000513769 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 ANKRD31Q8N7Z5 1873 aa11.67□□□□□ -0.54
TPM3-221ENST00000513769 SLC3A2P08195 630 aaKnown RBP11.66□□□□□ -0.54
TPM3-221ENST00000513769 KCNA3P22001 575 aa11.66□□□□□ -0.54
TPM3-221ENST00000513769 CHAF1AQ13111 956 aaPredicted RBP11.66□□□□□ -0.54
TPM3-221ENST00000513769 AKNAD1Q5T1N1 836 aa11.66□□□□□ -0.54
TPM3-221ENST00000513769 HHIPL2Q6UWX4 724 aa11.66□□□□□ -0.54
TPM3-221ENST00000513769 MFSD6Q6ZSS7 791 aa11.66□□□□□ -0.54
TPM3-221ENST00000513769 RALYLQ86SE5 291 aaKnown RBP11.66□□□□□ -0.54
TPM3-221ENST00000513769 ZNF526Q8TF50 670 aaPredicted RBP11.66□□□□□ -0.54
TPM3-221ENST00000513769 TMEM87BQ96K49 555 aa11.66□□□□□ -0.54
TPM3-221ENST00000513769 LLPHQ9BRT6 129 aaKnown RBP11.66□□□□□ -0.54
TPM3-221ENST00000513769 ARMT1Q9H993 441 aa11.66□□□□□ -0.54
TPM3-221ENST00000513769 CDHR5Q9HBB8 845 aa11.66□□□□□ -0.54
TPM3-221ENST00000513769 DHX16O60231 1041 aaKnown RBP11.65□□□□□ -0.54
TPM3-221ENST00000513769 PRDX5P30044 214 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 LIFRP42702 1097 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 PRSS12P56730 875 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 FGD1P98174 961 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 PPP2R5BQ15173 497 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 MFSD14BQ5SR56 506 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 Q6ZUG5 572 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 LCORLQ8N3X6 602 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 ZNF384Q8TF68 577 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 STAG1Q8WVM7 1258 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 SLKQ9H2G2 1235 aaPredicted RBP11.65□□□□□ -0.54
TPM3-221ENST00000513769 LRRC37AA6NMS7 1700 aa11.65□□□□□ -0.54
TPM3-221ENST00000513769 C10orf71Q711Q0 1435 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 PDCP20941 246 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 PTMSP20962 102 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 CHRNA5P30532 468 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 TDO2P48775 406 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 GTF2IP78347 998 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 TOB2Q14106 344 aaPredicted RBP11.64□□□□□ -0.55
TPM3-221ENST00000513769 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 AMOTL1Q8IY63 956 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 ZNF287Q9HBT7 754 aa11.64□□□□□ -0.55
TPM3-221ENST00000513769 DUOX1Q9NRD9 1551 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 USP17L3A6NCW0 530 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 USP17L4A6NCW7 530 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 DPEP1P16444 411 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 HSPA6P17066 643 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 RCAN1P53805 252 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 PPARAQ07869 468 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
TPM3-221ENST00000513769 RAB3GAP1Q15042 981 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 ME3Q16798 604 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 CCDC178Q5BJE1 867 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 STOX1Q6ZVD7 989 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 ADGRA1Q86SQ6 560 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 MB21D2Q8IYB1 491 aaPredicted RBP11.63□□□□□ -0.55
TPM3-221ENST00000513769 MIGA1Q8NAN2 632 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 KCNV2Q8TDN2 545 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 DCP1AQ9NPI6 582 aaPredicted RBP11.63□□□□□ -0.55
TPM3-221ENST00000513769 ARPP21Q9UBL0 812 aaPredicted RBP11.63□□□□□ -0.55
TPM3-221ENST00000513769 FAM198AQ9UFP1 575 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
TPM3-221ENST00000513769 TPCN1Q9ULQ1 816 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 CCDC88AQ3V6T2 1871 aa11.63□□□□□ -0.55
TPM3-221ENST00000513769 GOLGB1Q14789 3259 aaKnown RBP11.62□□□□□ -0.55
TPM3-221ENST00000513769 MROH7-TTC4A0A0A0MT08 1334 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms