RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 FOXQ1Q9C009 403 aa6.96□□□□□ -1.3
ATP2C1-220ENST00000513636 PRDM5Q9NQX1 630 aaPredicted RBP6.96□□□□□ -1.3
ATP2C1-220ENST00000513636 LMCD1Q9NZU5 365 aa6.96□□□□□ -1.3
ATP2C1-220ENST00000513636 TSPAN15O95858 294 aa6.95□□□□□ -1.3
ATP2C1-220ENST00000513636 ECM1Q16610 540 aa6.95□□□□□ -1.3
ATP2C1-220ENST00000513636 LRRC56Q8IYG6 542 aaPredicted RBP6.95□□□□□ -1.3
ATP2C1-220ENST00000513636 CCDC120Q96HB5 630 aa6.95□□□□□ -1.3
ATP2C1-220ENST00000513636 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
ATP2C1-220ENST00000513636 DCDC2CA8MYV0 355 aa6.94□□□□□ -1.3
ATP2C1-220ENST00000513636 FANCGO15287 622 aa6.94□□□□□ -1.3
ATP2C1-220ENST00000513636 CFPP27918 469 aa6.94□□□□□ -1.3
ATP2C1-220ENST00000513636 NKPD1Q17RQ9 610 aa6.94□□□□□ -1.3
ATP2C1-220ENST00000513636 PRR23BQ6ZRT6 265 aa6.94□□□□□ -1.3
ATP2C1-220ENST00000513636 C12orf40Q86WS4 652 aa6.94□□□□□ -1.3
ATP2C1-220ENST00000513636 STK35Q8TDR2 534 aa6.94□□□□□ -1.3
ATP2C1-220ENST00000513636 LRRC14Q15048 493 aa6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 FYB2Q5VWT5 728 aa6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 FAM214BQ7L5A3 538 aa6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 NPAS4Q8IUM7 802 aa6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 ELMO3Q96BJ8 720 aa6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 ALKBH8Q96BT7 664 aaKnown RBP6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 CEP44Q9C0F1 390 aa6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 CARS2Q9HA77 564 aaKnown RBP6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 MAPK8IP1Q9UQF2 711 aa6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 PITPNM2Q9BZ72 1349 aa6.93□□□□□ -1.3
ATP2C1-220ENST00000513636 TMEM253P0C7T8 217 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 ZNF865P0CJ78 1059 aaPredicted RBP6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 ZSCAN22P10073 491 aaPredicted RBP6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 CDKAL1Q5VV42 579 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 PI16Q6UXB8 463 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 SIAH1Q8IUQ4 282 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 FBXO15Q8NCQ5 510 aaPredicted RBP6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 ZNF507Q8TCN5 953 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 DIRC2Q96SL1 478 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 RBCK1Q9BYM8 510 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 PCDHA4Q9UN74 947 aa6.92□□□□□ -1.3
ATP2C1-220ENST00000513636 TRIM37O94972 964 aa6.91□□□□□ -1.3
ATP2C1-220ENST00000513636 ZNF252P-AS1Q0IIN9 211 aa6.91□□□□□ -1.3
ATP2C1-220ENST00000513636 LILRA6Q6PI73 481 aa6.91□□□□□ -1.3
ATP2C1-220ENST00000513636 HSPA12BQ96MM6 686 aa6.91□□□□□ -1.3
ATP2C1-220ENST00000513636 LRIG2O94898 1065 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 EOMESO95936 686 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 RAC2P15153 192 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 PLCB3Q01970 1234 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 SFRP5Q5T4F7 317 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 LLGL2Q6P1M3 1020 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 TPTE2Q6XPS3 522 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 ARMCX6Q7L4S7 300 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 NSUN3Q9H649 340 aaKnown RBP6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 ATP13A1Q9HD20 1204 aa6.9□□□□□ -1.3
ATP2C1-220ENST00000513636 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 GSTT1P30711 240 aa6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 GDNFP39905 211 aa6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 ZBTB37Q5TC79 503 aa6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 MPRIPQ6WCQ1 1025 aa6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 MFSD4AQ8N468 514 aa6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 GRIN3AQ8TCU5 1115 aa6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 NECAB3Q96P71 396 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 BIN2Q9UBW5 565 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-220ENST00000513636 H3BS24 57 aa6.88□□□□□ -1.31
ATP2C1-220ENST00000513636 IGHA2P01877 340 aa6.88□□□□□ -1.31
ATP2C1-220ENST00000513636 C1QTNF9P0C862 333 aa6.88□□□□□ -1.31
ATP2C1-220ENST00000513636 PDE4CQ08493 712 aa6.88□□□□□ -1.31
ATP2C1-220ENST00000513636 DCP1AQ9NPI6 582 aaPredicted RBP6.88□□□□□ -1.31
ATP2C1-220ENST00000513636 PNMA6FA0A0J9YX94 578 aa6.87□□□□□ -1.31
ATP2C1-220ENST00000513636 PRAMEF27A3QJZ7 478 aa6.87□□□□□ -1.31
ATP2C1-220ENST00000513636 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.87□□□□□ -1.31
ATP2C1-220ENST00000513636 BMP6P22004 513 aa6.87□□□□□ -1.31
ATP2C1-220ENST00000513636 ZNF746Q6NUN9 644 aaPredicted RBP6.87□□□□□ -1.31
ATP2C1-220ENST00000513636 MIPEPQ99797 713 aa6.87□□□□□ -1.31
ATP2C1-220ENST00000513636 CYP8B1Q9UNU6 501 aa6.87□□□□□ -1.31
ATP2C1-220ENST00000513636 TCAF2A6NFQ2 919 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 NPIPB6E9PJ23 425 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 CYP7A1P22680 504 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 FGD1P98174 961 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 SCARA3Q6AZY7 606 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 CIAPIN1Q6FI81 312 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 LCNL1Q6ZST4 164 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 HDXQ7Z353 690 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 TMC7Q7Z402 723 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 UBE3DQ7Z6J8 389 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 MFSD2AQ8NA29 543 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 ABHD4Q8TB40 342 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 ALPK1Q96QP1 1244 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 SRCIN1Q9C0H9 1055 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 EPB41L4BQ9H329 900 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 CCDC180Q9P1Z9 1646 aa6.86□□□□□ -1.31
ATP2C1-220ENST00000513636 SLITRK5O94991 958 aa6.85□□□□□ -1.31
ATP2C1-220ENST00000513636 CBX7O95931 251 aa6.85□□□□□ -1.31
ATP2C1-220ENST00000513636 NTF4P34130 210 aa6.85□□□□□ -1.31
ATP2C1-220ENST00000513636 ETF1P62495 437 aaKnown RBP6.85□□□□□ -1.31
ATP2C1-220ENST00000513636 RING1Q06587 406 aa6.85□□□□□ -1.31
ATP2C1-220ENST00000513636 TTC6Q86TZ1 520 aa6.85□□□□□ -1.31
ATP2C1-220ENST00000513636 TXNDC2Q86VQ3 553 aa6.85□□□□□ -1.31
ATP2C1-220ENST00000513636 UBE2FQ969M7 185 aa6.85□□□□□ -1.31
ATP2C1-220ENST00000513636 SEMA3GQ9NS98 782 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms