RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 MFSD14BQ5SR56 506 aa7.42□□□□□ -1.22
GYPB-213ENST00000513128 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.42□□□□□ -1.22
GYPB-213ENST00000513128 OTOP1Q7RTM1 612 aa7.42□□□□□ -1.22
GYPB-213ENST00000513128 ZNF70Q9UC06 446 aaPredicted RBP7.42□□□□□ -1.22
GYPB-213ENST00000513128 TTF2Q9UNY4 1162 aaKnown RBP7.42□□□□□ -1.22
GYPB-213ENST00000513128 IQSEC3Q9UPP2 1182 aaPredicted RBP7.42□□□□□ -1.22
GYPB-213ENST00000513128 RIPOR2Q9Y4F9 1068 aa7.42□□□□□ -1.22
GYPB-213ENST00000513128 TRIM17Q9Y577 477 aa7.42□□□□□ -1.22
GYPB-213ENST00000513128 PPP2R3BQ9Y5P8 575 aa7.42□□□□□ -1.22
GYPB-213ENST00000513128 HTTP42858 3142 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 TCP10L2B9ZVM9 353 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 MYO1BO43795 1136 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 HIBADHP31937 336 aaKnown RBP7.41□□□□□ -1.22
GYPB-213ENST00000513128 CACNB3P54284 484 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 INHBEP58166 350 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 MTMR2Q13614 643 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 ELOAQ14241 798 aaKnown RBP7.41□□□□□ -1.22
GYPB-213ENST00000513128 SUPT20HL1Q3ZLR7 823 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 LRRC24Q50LG9 513 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 TAF7LQ5H9L4 462 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 DZIP1LQ8IYY4 767 aaKnown RBP7.41□□□□□ -1.22
GYPB-213ENST00000513128 ANKRD44Q8N8A2 993 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 KLHDC4Q8TBB5 520 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 CD99L2Q8TCZ2 262 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 TATDN2Q93075 761 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 OPTNQ96CV9 577 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 SRCIN1Q9C0H9 1055 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 TMEM39BQ9GZU3 492 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 BICC1Q9H694 974 aaKnown RBP7.41□□□□□ -1.22
GYPB-213ENST00000513128 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 C9orf78Q9NZ63 289 aaPredicted RBP7.41□□□□□ -1.22
GYPB-213ENST00000513128 PNMA3Q9UL41 463 aa7.41□□□□□ -1.22
GYPB-213ENST00000513128 MYH13Q9UKX3 1938 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 SMAPO00193 183 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 ALDH1L1O75891 902 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 ALDH1A1P00352 501 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 NUDT7P0C024 238 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 CRKP46108 304 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 IREB2P48200 963 aaKnown RBP7.4□□□□□ -1.22
GYPB-213ENST00000513128 USP46P62068 366 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 VGLL4Q14135 290 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 UBE4AQ14139 1066 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 RABL6Q3YEC7 729 aaPredicted RBP7.4□□□□□ -1.22
GYPB-213ENST00000513128 B4GALNT3Q6L9W6 998 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 FBXO33Q7Z6M2 555 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 ANKRD13AQ8IZ07 590 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 FAM9BQ8IZU0 186 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 VGLL2Q8N8G2 317 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 SP7Q8TDD2 431 aaPredicted RBP7.4□□□□□ -1.22
GYPB-213ENST00000513128 BRI3BPQ8WY22 251 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 NOVA2Q9UNW9 492 aaKnown RBP7.4□□□□□ -1.22
GYPB-213ENST00000513128 UTYO14607 1347 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 ZNF521Q96K83 1311 aa7.4□□□□□ -1.22
GYPB-213ENST00000513128 CENPFP49454 3210 aa7.39□□□□□ -1.23
GYPB-213ENST00000513128 ZNF16P17020 682 aaPredicted RBP7.39□□□□□ -1.23
GYPB-213ENST00000513128 BCAMP50895 628 aa7.39□□□□□ -1.23
GYPB-213ENST00000513128 CHAF1AQ13111 956 aaPredicted RBP7.39□□□□□ -1.23
GYPB-213ENST00000513128 FAM43AQ8N2R8 423 aa7.39□□□□□ -1.23
GYPB-213ENST00000513128 MRPL50Q8N5N7 158 aaKnown RBP7.39□□□□□ -1.23
GYPB-213ENST00000513128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.39□□□□□ -1.235e-10■□□□□ 9.2
GYPB-213ENST00000513128 PTPN22Q9Y2R2 807 aa7.39□□□□□ -1.23
GYPB-213ENST00000513128 BRCA2P51587 3418 aa7.39□□□□□ -1.23
GYPB-213ENST00000513128 MROH5Q6ZUA9 1318 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 ANP32CO43423 234 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 PDE8BO95263 885 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 EN2P19622 333 aaPredicted RBP7.38□□□□□ -1.23
GYPB-213ENST00000513128 SP3Q02447 781 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 APOBEC3HQ6NTF7 200 aaKnown RBP7.38□□□□□ -1.23
GYPB-213ENST00000513128 ARMC5Q96C12 935 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 OTUD5Q96G74 571 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 ERO1AQ96HE7 468 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 ARHGAP39Q9C0H5 1083 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 USP44Q9H0E7 712 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 SNCAIPQ9Y6H5 919 aa7.38□□□□□ -1.23
GYPB-213ENST00000513128 CCL15-CCL14A0A0B4J2E2 113 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 FGFR2P21802 821 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 RFX5P48382 616 aaPredicted RBP7.37□□□□□ -1.23
GYPB-213ENST00000513128 TNFAIP1Q13829 316 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 CCL15Q16663 113 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 METTL24Q5JXM2 366 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 SLF2Q8IX21 1173 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 SSH1Q8WYL5 1049 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 SYMPKQ92797 1274 aaKnown RBP7.37□□□□□ -1.23
GYPB-213ENST00000513128 ZKSCAN4Q969J2 545 aaPredicted RBP7.37□□□□□ -1.23
GYPB-213ENST00000513128 EFCC1Q9HA90 598 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 PTCH2Q9Y6C5 1203 aa7.37□□□□□ -1.23
GYPB-213ENST00000513128 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
GYPB-213ENST00000513128 SOWAHDA6NJG2 315 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 MYCP01106 439 aaPredicted RBP7.36□□□□□ -1.23
GYPB-213ENST00000513128 CTGFP29279 349 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 SCNN1AP37088 669 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 SERPINB4P48594 390 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
GYPB-213ENST00000513128 TAF1CQ15572 869 aaPredicted RBP7.36□□□□□ -1.23
GYPB-213ENST00000513128 OTUD7BQ6GQQ9 843 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 MIGA2Q7L4E1 593 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 ATG9AQ7Z3C6 839 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 VPS37DQ86XT2 251 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 FAM177A1Q8N128 213 aaPredicted RBP7.36□□□□□ -1.23
GYPB-213ENST00000513128 TEKT1Q969V4 418 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms