RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TESPA1A2RU30 521 aaPredicted RBP7.89□□□□□ -1.15
KDM3B-208ENST00000512928 TRIM75PA6NK02 468 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 HLA-DOAP06340 250 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 NOL9Q5SY16 702 aaKnown RBP7.89□□□□□ -1.15
KDM3B-208ENST00000512928 SLC9C2Q5TAH2 1124 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 CCDC84Q86UT8 332 aaPredicted RBP7.89□□□□□ -1.15
KDM3B-208ENST00000512928 CD99L2Q8TCZ2 262 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 EDC3Q96F86 508 aaKnown RBP7.89□□□□□ -1.15
KDM3B-208ENST00000512928 ERO1AQ96HE7 468 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 GPATCH3Q96I76 525 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 CRBNQ96SW2 442 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 CFHR5Q9BXR6 569 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 PAG1Q9NWQ8 432 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.89□□□□□ -1.15
KDM3B-208ENST00000512928 ZBTB47Q9UFB7 747 aaPredicted RBP7.89□□□□□ -1.15
KDM3B-208ENST00000512928 TRIM17Q9Y577 477 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 LAMB1P07942 1786 aa7.89□□□□□ -1.15
KDM3B-208ENST00000512928 DOCK1Q14185 1865 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 MYO5AQ9Y4I1 1855 aaKnown RBP7.88□□□□□ -1.15
KDM3B-208ENST00000512928 ZNF532Q9HCE3 1301 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 MAGEB6P1A0A0J9YX57 407 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 POTEFA5A3E0 1075 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 PHF20L1A8MW92 1017 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 BTBD19C9JJ37 291 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 PDHXO00330 501 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 CTNND1O60716 968 aaKnown RBP7.88□□□□□ -1.15
KDM3B-208ENST00000512928 PDE6AP16499 860 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 PTPRAP18433 802 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 PPP4CP60510 307 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 SP3Q02447 781 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 PKN2Q16513 984 aaKnown RBP7.88□□□□□ -1.15
KDM3B-208ENST00000512928 TSHZ3Q63HK5 1081 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 CERS3Q8IU89 383 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.88□□□□□ -1.159e-9■■■■■ 29.2
KDM3B-208ENST00000512928 DHX36Q9H2U1 1008 aaKnown RBP7.88□□□□□ -1.15
KDM3B-208ENST00000512928 PI4KBQ9UBF8 816 aa7.88□□□□□ -1.15
KDM3B-208ENST00000512928 HERC5Q9UII4 1024 aaKnown RBP7.88□□□□□ -1.15
KDM3B-208ENST00000512928 COL2A1P02458 1487 aaPredicted RBP7.87□□□□□ -1.15
KDM3B-208ENST00000512928 TBC1D12O60347 775 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 IGSF3O75054 1194 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 GDF11O95390 407 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 POLR3DP05423 398 aaPredicted RBP7.87□□□□□ -1.15
KDM3B-208ENST00000512928 CYP2C8P10632 490 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 ATP5JP18859 108 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 KIF22Q14807 665 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 NOM1Q5C9Z4 860 aaKnown RBP7.87□□□□□ -1.15
KDM3B-208ENST00000512928 ANKRD23Q86SG2 305 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.87□□□□□ -1.15
KDM3B-208ENST00000512928 PARK7Q99497 189 aaKnown RBP7.87□□□□□ -1.15
KDM3B-208ENST00000512928 CRNKL1Q9BZJ0 848 aaKnown RBP7.87□□□□□ -1.15
KDM3B-208ENST00000512928 EFCC1Q9HA90 598 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 ECHDC1Q9NTX5 307 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 CPA4Q9UI42 421 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 KCNH4Q9UQ05 1017 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 PCDHB15Q9Y5E8 787 aa7.87□□□□□ -1.15
KDM3B-208ENST00000512928 CXCL11O14625 94 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 TLR2O60603 784 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 MBD4O95243 580 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 MYCP01106 439 aaPredicted RBP7.86□□□□□ -1.15
KDM3B-208ENST00000512928 CAP2P40123 477 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 SPP2Q13103 211 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 ARHGEF6Q15052 776 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 SLFNL1Q499Z3 407 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 PRPF38BQ5VTL8 546 aaKnown RBP7.86□□□□□ -1.15
KDM3B-208ENST00000512928 ZSCAN25Q6NSZ9 544 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 FBXO46Q6PJ61 603 aaPredicted RBP7.86□□□□□ -1.15
KDM3B-208ENST00000512928 FASTKD5Q7L8L6 764 aaKnown RBP7.86□□□□□ -1.15
KDM3B-208ENST00000512928 OTOP1Q7RTM1 612 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 FOXP4Q8IVH2 680 aaPredicted RBP7.86□□□□□ -1.15
KDM3B-208ENST00000512928 LCORLQ8N3X6 602 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 SMCR8Q8TEV9 937 aaPredicted RBP7.86□□□□□ -1.15
KDM3B-208ENST00000512928 SDR42E1Q8WUS8 393 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 HAUS7Q99871 368 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 DCTPP1Q9H773 170 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 ARMT1Q9H993 441 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 AS3MTQ9HBK9 375 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 ZCCHC17Q9NP64 241 aaKnown RBP7.86□□□□□ -1.15
KDM3B-208ENST00000512928 FOXD4L1Q9NU39 408 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 MCM9Q9NXL9 1143 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 AFG3L2Q9Y4W6 797 aa7.86□□□□□ -1.15
KDM3B-208ENST00000512928 RBBP6Q7Z6E9 1792 aaKnown RBP7.86□□□□□ -1.15
KDM3B-208ENST00000512928 CDK5RAP2Q96SN8 1893 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 FOCADQ5VW36 1801 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 ATAD5Q96QE3 1844 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 A0A0G2JLL6 359 aaPredicted RBP7.85□□□□□ -1.15
KDM3B-208ENST00000512928 USP17L5A8MUK1 530 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 MPHOSPH10O00566 681 aaKnown RBP7.85□□□□□ -1.15
KDM3B-208ENST00000512928 FMNL1O95466 1100 aaPredicted RBP7.85□□□□□ -1.15
KDM3B-208ENST00000512928 ASNSP08243 561 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 ADD2P35612 726 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 HMGCS2P54868 508 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 MAP3K10Q02779 954 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 MTMR2Q13614 643 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 AAMPQ13685 434 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 RRP1BQ14684 758 aaKnown RBP7.85□□□□□ -1.15
KDM3B-208ENST00000512928 SHROOM1Q2M3G4 852 aaPredicted RBP7.85□□□□□ -1.15
KDM3B-208ENST00000512928 TMED8Q6PL24 325 aaPredicted RBP7.85□□□□□ -1.15
KDM3B-208ENST00000512928 PRRT2Q7Z6L0 340 aaPredicted RBP7.85□□□□□ -1.15
KDM3B-208ENST00000512928 TTC6Q86TZ1 520 aa7.85□□□□□ -1.15
KDM3B-208ENST00000512928 AMOTL1Q8IY63 956 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms