RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PRDM10Q9NQV6 1147 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 PPM1HQ9ULR3 514 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 CYP8B1Q9UNU6 501 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 PCDHB5Q9Y5E4 795 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 FANCGO15287 622 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 C8AP07357 584 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 ITIH2P19823 946 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 GNA15P30679 374 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 TAGLNQ01995 201 aaKnown RBP4.39□□□□□ -1.71
PDGFC-208ENST00000512711 LRRC14Q15048 493 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 ZNF792Q3KQV3 632 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 CYFIP1Q7L576 1253 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 GAL3ST3Q96A11 431 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 PLPPR2Q96GM1 343 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 PRDM7Q9NQW5 492 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 MBNL3Q9NUK0 354 aaKnown RBP4.39□□□□□ -1.71
PDGFC-208ENST00000512711 VAV3Q9UKW4 847 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 AK5Q9Y6K8 562 aa4.39□□□□□ -1.71
PDGFC-208ENST00000512711 PRPF40AO75400 957 aaKnown RBP4.38□□□□□ -1.71
PDGFC-208ENST00000512711 SLITRK5O94991 958 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 RNASE1P07998 156 aaKnown RBP4.38□□□□□ -1.71
PDGFC-208ENST00000512711 ITGB5P18084 799 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 PRKCQQ04759 706 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 SLBPQ14493 270 aaKnown RBP eCLIP4.38□□□□□ -1.71
PDGFC-208ENST00000512711 PLCL1Q15111 1095 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 MAP3K11Q16584 847 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 NKPD1Q17RQ9 610 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 MEI1Q5TIA1 1274 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 TTBK2Q6IQ55 1244 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 SV2BQ7L1I2 683 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 FAM161BQ96MY7 647 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 PICK1Q9NRD5 415 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 TTF2Q9UNY4 1162 aaKnown RBP4.38□□□□□ -1.71
PDGFC-208ENST00000512711 SAMM50Q9Y512 469 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 CARMIL2Q6F5E8 1435 aa4.38□□□□□ -1.71
PDGFC-208ENST00000512711 PRAMEF27A3QJZ7 478 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 PRR33A8MZF0 331 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 GFRA2O00451 464 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 PAPLNO95428 1278 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 CEACAM5P06731 702 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 FUT4P22083 530 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 EIF4BP23588 611 aaKnown RBP4.37□□□□□ -1.71
PDGFC-208ENST00000512711 SEPT6Q14141 434 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 CCDC85BQ15834 202 aaPredicted RBP4.37□□□□□ -1.71
PDGFC-208ENST00000512711 IFI16Q16666 785 aaKnown RBP4.37□□□□□ -1.71
PDGFC-208ENST00000512711 DNAJC14Q6Y2X3 702 aaPredicted RBP4.37□□□□□ -1.71
PDGFC-208ENST00000512711 CDC37L1Q7L3B6 337 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 ARMCX6Q7L4S7 300 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 POU5F2Q8N7G0 328 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 AGBL5Q8NDL9 886 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 ELMO3Q96BJ8 720 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 WNT10AQ9GZT5 417 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 TNKS2Q9H2K2 1166 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 MKNK2Q9HBH9 465 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 PARP2Q9UGN5 583 aa4.37□□□□□ -1.71
PDGFC-208ENST00000512711 TMEM265A0A087WTH1 108 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 F6X3S4 739 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 CTSHP09668 335 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 EAPPQ56P03 285 aaPredicted RBP4.36□□□□□ -1.71
PDGFC-208ENST00000512711 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 SND1Q7KZF4 910 aaKnown RBP eCLIP4.36□□□□□ -1.71
PDGFC-208ENST00000512711 SPACA3Q8IXA5 215 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 STK11IPQ8N1F8 1099 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 ZNF507Q8TCN5 953 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 MISP3Q96FF7 219 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 ASIC4Q96FT7 647 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 TLR6Q9Y2C9 796 aa4.36□□□□□ -1.71
PDGFC-208ENST00000512711 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.36□□□□□ -1.71
PDGFC-208ENST00000512711 IGF2BP3O00425 579 aaKnown RBP eCLIP4.35□□□□□ -1.71
PDGFC-208ENST00000512711 TFE3P19532 575 aaPredicted RBP4.35□□□□□ -1.71
PDGFC-208ENST00000512711 GRK4P32298 578 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 WIPI1Q5MNZ9 446 aaPredicted RBP4.35□□□□□ -1.71
PDGFC-208ENST00000512711 SCARA3Q6AZY7 606 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 AGMOQ6ZNB7 445 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 ARHGAP27Q6ZUM4 889 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 HDXQ7Z353 690 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 NPAS4Q8IUM7 802 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 LRRN4CLQ8ND94 238 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 PI4K2BQ8TCG2 481 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 XAGE3Q8WTP9 111 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 HRASLS5Q96KN8 279 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 FRMD6Q96NE9 622 aa4.35□□□□□ -1.71
PDGFC-208ENST00000512711 LRIG2O94898 1065 aa4.34□□□□□ -1.71
PDGFC-208ENST00000512711 LIG3P49916 1009 aa4.34□□□□□ -1.71
PDGFC-208ENST00000512711 ETF1P62495 437 aaKnown RBP4.34□□□□□ -1.71
PDGFC-208ENST00000512711 HNRNPUQ00839 825 aaKnown RBP eCLIP4.34□□□□□ -1.71
PDGFC-208ENST00000512711 CDH24Q86UP0 819 aa4.34□□□□□ -1.71
PDGFC-208ENST00000512711 JARID2Q92833 1246 aaPredicted RBP4.34□□□□□ -1.71
PDGFC-208ENST00000512711 DPH2Q9BQC3 489 aaPredicted RBP4.34□□□□□ -1.71
PDGFC-208ENST00000512711 FOXQ1Q9C009 403 aa4.34□□□□□ -1.71
PDGFC-208ENST00000512711 RC3H2Q9HBD1 1191 aaKnown RBP4.34□□□□□ -1.71
PDGFC-208ENST00000512711 GTF2IRD1Q9UHL9 959 aa4.34□□□□□ -1.71
PDGFC-208ENST00000512711 SNX11Q9Y5W9 270 aa4.34□□□□□ -1.71
PDGFC-208ENST00000512711 SNCAIPQ9Y6H5 919 aa4.34□□□□□ -1.71
PDGFC-208ENST00000512711 WASH4PA8MWX3 477 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 PDIA4P13667 645 aaKnown RBP4.33□□□□□ -1.72
PDGFC-208ENST00000512711 JUNBP17275 347 aaPredicted RBP4.33□□□□□ -1.72
PDGFC-208ENST00000512711 DAB2P98082 770 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 CDKAL1Q5VV42 579 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms