RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 TCP10Q12799 353 aa12.49□□□□□ -0.41
NEDD9-213ENST00000512665 NFIAQ12857 509 aa12.49□□□□□ -0.41
NEDD9-213ENST00000512665 MORN1Q5T089 497 aa12.49□□□□□ -0.41
NEDD9-213ENST00000512665 LDHAL6AQ6ZMR3 332 aa12.49□□□□□ -0.41
NEDD9-213ENST00000512665 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
NEDD9-213ENST00000512665 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
NEDD9-213ENST00000512665 FAM198AQ9UFP1 575 aa12.49□□□□□ -0.41
NEDD9-213ENST00000512665 DAGLAQ9Y4D2 1042 aa12.49□□□□□ -0.41
NEDD9-213ENST00000512665 EPHB4P54760 987 aa12.48□□□□□ -0.41
NEDD9-213ENST00000512665 FOXO4P98177 505 aa12.48□□□□□ -0.41
NEDD9-213ENST00000512665 ADGRE1Q14246 886 aa12.48□□□□□ -0.41
NEDD9-213ENST00000512665 TRIM60Q495X7 471 aa12.48□□□□□ -0.41
NEDD9-213ENST00000512665 CDC42EP5Q6NZY7 148 aa12.48□□□□□ -0.41
NEDD9-213ENST00000512665 KCNH6Q9H252 994 aa12.48□□□□□ -0.41
NEDD9-213ENST00000512665 PRDM12Q9H4Q4 367 aa12.48□□□□□ -0.41
NEDD9-213ENST00000512665 RFX7Q2KHR2 1363 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 FOXK2Q01167 660 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 CHAF1AQ13111 956 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-213ENST00000512665 CCL14Q16627 93 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 SH3RF1Q7Z6J0 888 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 VPS37DQ86XT2 251 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 ARRDC4Q8NCT1 418 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 CNNM1Q9NRU3 951 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 LRRFIP2Q9Y608 721 aaKnown RBP12.47□□□□□ -0.41
NEDD9-213ENST00000512665 TACC3Q9Y6A5 838 aa12.47□□□□□ -0.41
NEDD9-213ENST00000512665 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
NEDD9-213ENST00000512665 TRANK1O15050 2925 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 KIF16BQ96L93 1317 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 PRR33A8MZF0 331 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 KIAA0355O15063 1070 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 ERC2O15083 957 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 PLIN1O60240 522 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 ENTPD3O75355 529 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 CCDC57Q2TAC2 916 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 SH3D19Q5HYK7 790 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 IDI2Q9BXS1 227 aa12.46□□□□□ -0.41
NEDD9-213ENST00000512665 KBTBD13C9JR72 458 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 IGHA2P01877 340 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 ITGB8P26012 769 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 HOXA7P31268 230 aaPredicted RBP12.45□□□□□ -0.42
NEDD9-213ENST00000512665 NHLH1Q02575 133 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 FPGSQ05932 587 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 CAVIN4Q5BKX8 364 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 GPR142Q7Z601 462 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 ZNF280CQ8ND82 737 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 LINS1Q8NG48 757 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 GTF3C2Q8WUA4 911 aaPredicted RBP12.45□□□□□ -0.42
NEDD9-213ENST00000512665 PBX4Q9BYU1 374 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 IFT57Q9NWB7 429 aa12.45□□□□□ -0.42
NEDD9-213ENST00000512665 WDFY4Q6ZS81 3184 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 PI4K2BG5E9Z4 385 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 SMIM22K7EJ46 135 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 FRAT2O75474 233 aaPredicted RBP12.44□□□□□ -0.42
NEDD9-213ENST00000512665 CLTBP09497 229 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 HOXC6P09630 235 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 CCDC85BQ15834 202 aaPredicted RBP12.44□□□□□ -0.42
NEDD9-213ENST00000512665 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 RASIP1Q5U651 963 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 ZFPM1Q8IX07 1006 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 HERVK_113Q902F9 699 aa12.44□□□□□ -0.42
NEDD9-213ENST00000512665 IQSEC3Q9UPP2 1182 aaPredicted RBP12.44□□□□□ -0.42
NEDD9-213ENST00000512665 MROH5Q6ZUA9 1318 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 LRRC37A2A6NM11 1700 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 TBC1D12O60347 775 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 KCNQ1P51787 676 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 HMGCS2P54868 508 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
NEDD9-213ENST00000512665 TFF2Q03403 129 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 SPP2Q13103 211 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 PLEKHH3Q7Z736 793 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 ZNF594Q96JF6 807 aaPredicted RBP12.43□□□□□ -0.42
NEDD9-213ENST00000512665 TXNRD2Q9NNW7 524 aa12.43□□□□□ -0.42
NEDD9-213ENST00000512665 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
NEDD9-213ENST00000512665 CYBAP13498 195 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 RAG1P15918 1043 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 IGFBP4P22692 258 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 HERVK_113P62684 666 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 ERVK-24P63145 666 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 TLE2Q04725 743 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 RAB30Q15771 203 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 GJC2Q5T442 439 aaPredicted RBP12.42□□□□□ -0.42
NEDD9-213ENST00000512665 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 SH3BP5LQ7L8J4 393 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 C8orf58Q8NAV2 365 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 OSBPL5Q9H0X9 879 aaPredicted RBP12.42□□□□□ -0.42
NEDD9-213ENST00000512665 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
NEDD9-213ENST00000512665 CHMP3Q9Y3E7 222 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 PLXNA1Q9UIW2 1896 aa12.42□□□□□ -0.42
NEDD9-213ENST00000512665 FAM86C2PA6NEL3 165 aa12.41□□□□□ -0.42
NEDD9-213ENST00000512665 TLL1O43897 1013 aa12.41□□□□□ -0.42
NEDD9-213ENST00000512665 PBX2P40425 430 aa12.41□□□□□ -0.42
NEDD9-213ENST00000512665 RGS3P49796 1198 aa12.41□□□□□ -0.42
NEDD9-213ENST00000512665 GNAI1P63096 354 aa12.41□□□□□ -0.42
NEDD9-213ENST00000512665 CALD1Q05682 793 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms